Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_C23
(743 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2) 394 e-109
sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2) 392 e-109
sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2) 391 e-109
sp|P05086|EF2_MESAU Elongation factor 2 (EF-2) 391 e-109
sp|P05197|EF2_RAT Elongation factor 2 (EF-2) 391 e-109
sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2) 388 e-108
sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2) 382 e-106
sp|P13060|EF2_DROME Elongation factor 2 (EF-2) 377 e-104
sp|Q6BJ25|EF2_DEBHA Elongation factor 2 (EF-2) 330 3e-90
sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2) 330 3e-90
>sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2)
Length = 858
Score = 394 bits (1012), Expect = e-109
Identities = 182/247 (73%), Positives = 213/247 (86%)
Frame = +1
Query: 1 LKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDI 180
LKDLEE+HACIPIKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P + L+ DI
Sbjct: 558 LKDLEEDHACIPIKKSDPVVSYRETVSEESNVMCLSKSPNKHNRLYMKARPFPDGLAEDI 617
Query: 181 DAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKD 360
D G+++AR E+K+R RYL E Y+WDVTE+RKIWCFGPDG GPN++ D++KGVQYLNEIKD
Sbjct: 618 DKGEVSARQELKQRARYLAEKYEWDVTEARKIWCFGPDGTGPNILTDITKGVQYLNEIKD 677
Query: 361 SVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTAS 540
SVVA F WATK+GVLCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YA VLTA
Sbjct: 678 SVVAGFQWATKEGVLCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYACVLTAQ 737
Query: 541 PCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFT 720
P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT
Sbjct: 738 PRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFT 797
Query: 721 SELRAQT 741
++LR+ T
Sbjct: 798 ADLRSNT 804
>sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2)
Length = 858
Score = 392 bits (1008), Expect = e-109
Identities = 181/247 (73%), Positives = 212/247 (85%)
Frame = +1
Query: 1 LKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDI 180
LKDLEE+HACIPIKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P + L+ DI
Sbjct: 558 LKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDI 617
Query: 181 DAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKD 360
D G+++AR E+K+R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKD
Sbjct: 618 DKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKD 677
Query: 361 SVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTAS 540
SVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA
Sbjct: 678 SVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQ 737
Query: 541 PCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFT 720
P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT
Sbjct: 738 PRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFT 797
Query: 721 SELRAQT 741
++LR+ T
Sbjct: 798 ADLRSNT 804
>sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2)
Length = 858
Score = 391 bits (1005), Expect = e-109
Identities = 181/247 (73%), Positives = 211/247 (85%)
Frame = +1
Query: 1 LKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDI 180
LKDLEE+HACIPIKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P + L+ DI
Sbjct: 558 LKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDI 617
Query: 181 DAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKD 360
D G+++AR E+K R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKD
Sbjct: 618 DKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKD 677
Query: 361 SVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTAS 540
SVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA
Sbjct: 678 SVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQ 737
Query: 541 PCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFT 720
P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT
Sbjct: 738 PRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFT 797
Query: 721 SELRAQT 741
++LR+ T
Sbjct: 798 ADLRSNT 804
>sp|P05086|EF2_MESAU Elongation factor 2 (EF-2)
Length = 858
Score = 391 bits (1005), Expect = e-109
Identities = 181/247 (73%), Positives = 211/247 (85%)
Frame = +1
Query: 1 LKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDI 180
LKDLEE+HACIPIKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P + L+ DI
Sbjct: 558 LKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDI 617
Query: 181 DAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKD 360
D G+++AR E+K R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKD
Sbjct: 618 DKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKD 677
Query: 361 SVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTAS 540
SVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA
Sbjct: 678 SVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQ 737
Query: 541 PCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFT 720
P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT
Sbjct: 738 PRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFT 797
Query: 721 SELRAQT 741
++LR+ T
Sbjct: 798 ADLRSNT 804
>sp|P05197|EF2_RAT Elongation factor 2 (EF-2)
Length = 858
Score = 391 bits (1005), Expect = e-109
Identities = 181/247 (73%), Positives = 211/247 (85%)
Frame = +1
Query: 1 LKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDI 180
LKDLEE+HACIPIKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P + L+ DI
Sbjct: 558 LKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDI 617
Query: 181 DAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKD 360
D G+++AR E+K R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKD
Sbjct: 618 DKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKD 677
Query: 361 SVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTAS 540
SVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA
Sbjct: 678 SVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQ 737
Query: 541 PCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFT 720
P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT
Sbjct: 738 PRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFT 797
Query: 721 SELRAQT 741
++LR+ T
Sbjct: 798 ADLRSNT 804
>sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2)
Length = 858
Score = 388 bits (997), Expect = e-108
Identities = 180/247 (72%), Positives = 210/247 (85%)
Frame = +1
Query: 1 LKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDI 180
LKDLEE+HACIPIKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P + L+ DI
Sbjct: 558 LKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDI 617
Query: 181 DAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKD 360
D G+++AR E+K R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKD
Sbjct: 618 DKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKD 677
Query: 361 SVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTAS 540
SVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHR GGQIIPTARRC YASVLTA
Sbjct: 678 SVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRRGGQIIPTARRCLYASVLTAQ 737
Query: 541 PCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFT 720
P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT
Sbjct: 738 PRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFT 797
Query: 721 SELRAQT 741
++LR+ T
Sbjct: 798 ADLRSNT 804
>sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2)
Length = 852
Score = 382 bits (981), Expect = e-106
Identities = 180/247 (72%), Positives = 209/247 (84%)
Frame = +1
Query: 1 LKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDI 180
LKDLEE+HACIP+KKSDPVVSYRE+V S+++CLSKSPNKHNRL+ TA PM + L+ DI
Sbjct: 552 LKDLEEDHACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRLHCTAQPMPDGLADDI 611
Query: 181 DAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKD 360
+ G + AR E K R + L E Y++DVTE+RKIWCFGPDG GPNL++DV+KGVQYLNEIKD
Sbjct: 612 EGGTVNARDEFKARAKILAEKYEYDVTEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKD 671
Query: 361 SVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTAS 540
SVVA F WAT++GVL +ENMRGVRFN+HDVTLHADAIHRGGGQIIPTARR FYASVLTA
Sbjct: 672 SVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAE 731
Query: 541 PCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFT 720
P LLEPVY EIQ PE A+GGIY LN+RRG +F E QV GTP +VVKAYLPVNESF FT
Sbjct: 732 PRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFT 791
Query: 721 SELRAQT 741
++LR+ T
Sbjct: 792 ADLRSNT 798
>sp|P13060|EF2_DROME Elongation factor 2 (EF-2)
Length = 844
Score = 377 bits (967), Expect = e-104
Identities = 175/247 (70%), Positives = 206/247 (83%)
Frame = +1
Query: 1 LKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDI 180
LKDLEE+HACIP+KKSDPVVSYRE+VS+ S ++CLSKSPNKHNRL M A PM + L DI
Sbjct: 544 LKDLEEDHACIPLKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLLMKALPMPDGLPEDI 603
Query: 181 DAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKD 360
D G ++A+ E K R RYL E YD+DVTE+RKIWCFGPDG GPN ++D +K VQYLNEIKD
Sbjct: 604 DNGDVSAKDEFKARARYLSEKYDYDVTEARKIWCFGPDGTGPNFILDCTKSVQYLNEIKD 663
Query: 361 SVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTAS 540
SVVA F WA+K+G+L +EN+RGVRFNI+DVTLHADAIHRGGGQIIPT RRC YA+ +TA
Sbjct: 664 SVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAK 723
Query: 541 PCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFT 720
P L+EPVY CEIQ PE A+GGIY LN+RRG +F E QV GTP +VVKAYLPVNESF FT
Sbjct: 724 PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFT 783
Query: 721 SELRAQT 741
++LR+ T
Sbjct: 784 ADLRSNT 790
>sp|Q6BJ25|EF2_DEBHA Elongation factor 2 (EF-2)
Length = 842
Score = 330 bits (845), Expect = 3e-90
Identities = 162/247 (65%), Positives = 190/247 (76%)
Frame = +1
Query: 1 LKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDI 180
L DL+ +HA IP+K S P+VSYRE+V+ SS V LSKSPNKHNR+Y+ A P+ EE+S DI
Sbjct: 542 LSDLQNDHAGIPLKISPPIVSYRETVNAESSMVALSKSPNKHNRIYVKAQPIDEEVSLDI 601
Query: 181 DAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKD 360
+ G I R + K R R L + + WDVT++RKIWCFGPDGNGPNLVVD +K VQYLNEIKD
Sbjct: 602 EKGVINPRDDFKARARILADNHGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKD 661
Query: 361 SVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTAS 540
SVVAAF WATK+G + EN+R VR NI DVTLHADAIHRGGGQIIPT RR YAS+L A
Sbjct: 662 SVVAAFQWATKEGPIFGENVRSVRVNILDVTLHADAIHRGGGQIIPTMRRVTYASMLLAE 721
Query: 541 PCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFT 720
P + EPV+ EIQ PE A+GGIYS LNK+RG + SE Q GTP + VKAYLPVNESF F+
Sbjct: 722 PAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFS 781
Query: 721 SELRAQT 741
ELR T
Sbjct: 782 GELRQST 788
>sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2)
Length = 842
Score = 330 bits (845), Expect = 3e-90
Identities = 164/247 (66%), Positives = 190/247 (76%)
Frame = +1
Query: 1 LKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDI 180
LKDL+E+HA IP+K S PVVSYRESVS+ SS LSKSPNKHNR++MTA PMSEELS I
Sbjct: 542 LKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAI 601
Query: 181 DAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKD 360
+ G + R + K R R + + + WDVT++RKIWCFGPD G N+VVD +K V YLNEIKD
Sbjct: 602 ETGHVNPRDDFKVRARIMADEFGWDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKD 661
Query: 361 SVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTAS 540
SVVAAF WA+K+G + EEN+R RFNI DV LHADAIHRGGGQIIPTARR YAS L AS
Sbjct: 662 SVVAAFAWASKEGPMFEENLRSCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLAS 721
Query: 541 PCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFT 720
P + EPV+ EIQ E A+GGIYS LNK+RG +FSE Q GTP Y +KAYLPVNESF FT
Sbjct: 722 PIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESFGFT 781
Query: 721 SELRAQT 741
ELR T
Sbjct: 782 GELRQAT 788
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.317 0.133 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,614,882
Number of Sequences: 369166
Number of extensions: 1764914
Number of successful extensions: 5005
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4898
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6728100400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)