Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_022_B11
(514 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P20908|CA15_HUMAN Collagen alpha 1(V) chain precursor 81 1e-15
sp|P12107|CA1B_HUMAN Collagen alpha 1(XI) chain precursor 74 2e-13
sp|P08122|CO4A2_MOUSE Collagen alpha 2(IV) chain precursor 71 1e-12
sp|P04258|CA13_BOVIN Collagen alpha 1(III) chain 70 2e-12
sp|P05997|CO5A2_HUMAN Collagen alpha 2(V) chain precursor 68 1e-11
sp|P25940|CO5A3_HUMAN Collagen alpha 3(V) chain precursor 68 1e-11
sp|P13941|CO3A1_RAT Collagen alpha 1(III) chain precursor 67 2e-11
sp|P11087|CO1A1_MOUSE Collagen alpha 1(I) chain precursor 67 3e-11
sp|Q02388|CO7A1_HUMAN Collagen alpha 1(VII) chain precursor... 67 3e-11
sp|P02462|CO4A1_HUMAN Collagen alpha 1(IV) chain precursor 67 3e-11
>sp|P20908|CA15_HUMAN Collagen alpha 1(V) chain precursor
Length = 1838
Score = 81.3 bits (199), Expect = 1e-15
Identities = 64/216 (29%), Positives = 79/216 (36%), Gaps = 48/216 (22%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGD------------PGDRGQS 152
G G VG G PG PGP G PG MG G PG++G G +G+ PG++G+
Sbjct: 1441 GIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEK 1500
Query: 153 GNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPIXXXXXXXXXXXXXXXXXX 332
G+ G GPPGP GLPG GP
Sbjct: 1501 GDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPRGEAGHP 1560
Query: 333 ATFVPV------------------RTIRRDMLADDANAAKY------------------L 404
P R I L DD N Y L
Sbjct: 1561 GPPGPPGPPGEVIQPLPIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKL 1620
Query: 405 GSDIIKKPLGTQELPARTCKHLFDSDPNFIDGYYYI 512
+ +K+PLGTQ+ PARTCK L P+F DG Y++
Sbjct: 1621 EIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWV 1656
Score = 63.2 bits (152), Expect = 4e-10
Identities = 35/92 (38%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G DG G PG G PG +G G G G PG G+ G G G+RG+ G
Sbjct: 1264 GADGPQGPPGGIGNPGAVGEKGEPGEAGEPGPSGRSGPPGPKGERGEKGESGPSGAAGPP 1323
Query: 189 XXXXXXXXXXFPGDNGP---PGPIGLPGRDGP 275
PGD+GP PGP+G PG GP
Sbjct: 1324 GPKGP------PGDDGPKGSPGPVGFPGDPGP 1349
Score = 62.8 bits (151), Expect = 5e-10
Identities = 37/92 (40%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
GK G G G G PGP G PG G G PG +G G +G+PG GQ GN
Sbjct: 676 GKPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQ 735
Query: 189 XXXXXXXXXXFPGDNGP---PGPIGLPGRDGP 275
PG+ GP PG G+PG DGP
Sbjct: 736 GAIGP------PGEKGPLGKPGLPGMPGADGP 761
Score = 62.4 bits (150), Expect = 6e-10
Identities = 34/92 (36%), Positives = 40/92 (43%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
KDG G G PG G PGP+G G G G PG G G+ G+ G G +G I
Sbjct: 1049 KDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPG 1108
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
PG+ GP GP G G GP+
Sbjct: 1109 PQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPV 1140
Score = 61.2 bits (147), Expect = 1e-09
Identities = 35/89 (39%), Positives = 39/89 (43%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G DG G PG G GP G G+ G G PG GK G G PG RG++G
Sbjct: 937 GGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETG----------- 985
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
F G GPPGP G+ G GP
Sbjct: 986 ----------FQGKTGPPGPPGVVGPQGP 1004
Score = 61.2 bits (147), Expect = 1e-09
Identities = 32/89 (35%), Positives = 37/89 (41%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G+ G PG PG G G+ G G PG G G +G G+ G G
Sbjct: 964 GPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPP 1023
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G G PGP GLPG+DGP
Sbjct: 1024 GEQGLPGLAGKEGTKGDPGPAGLPGKDGP 1052
Score = 61.2 bits (147), Expect = 1e-09
Identities = 36/92 (39%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
GK G G PG G GP G G MG G+PG G G +G PG G+ G
Sbjct: 988 GKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLP 1047
Query: 189 XXXXXXXXXXFPGDNGPPGPI---GLPGRDGP 275
FPGD G PGP+ GL G +GP
Sbjct: 1048 GKDGPPGLRGFPGDRGLPGPVGALGLKGNEGP 1079
Score = 60.5 bits (145), Expect = 2e-09
Identities = 34/89 (38%), Positives = 38/89 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G G PGP+G PG G G PG G+ G GD GD G+ G
Sbjct: 1324 GPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGS------- 1376
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG G PGP G PG+ GP
Sbjct: 1377 -----------PGPTGEPGPSGPPGKRGP 1394
Score = 59.7 bits (143), Expect = 4e-09
Identities = 33/90 (36%), Positives = 39/90 (43%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
DG+ G G PG G+PGP G PG G G G G+ G +G G+ G G
Sbjct: 1368 DGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGP--------- 1418
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG GP GP G PG+ GP
Sbjct: 1419 ------------PGKTGPIGPQGAPGKPGP 1436
Score = 58.9 bits (141), Expect = 7e-09
Identities = 35/91 (38%), Positives = 41/91 (45%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
+DG +G GR G G PGPLG PG G +G PG+ G G +G G G G
Sbjct: 839 EDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPG--------- 889
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
FPG NG G G PG+ GP
Sbjct: 890 ------------FPGANGEKGGRGTPGKPGP 908
Score = 58.5 bits (140), Expect = 9e-09
Identities = 37/101 (36%), Positives = 42/101 (41%), Gaps = 12/101 (11%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGP---LGHPGW---------MGTVGNPGVRGKFGARGDPGDRGQS 152
GK G G PG PG+ GP +G PG+ GT G PG RG+ G G G+RG
Sbjct: 865 GKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPR 924
Query: 153 GNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G G NGP GP G PG GP
Sbjct: 925 GITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGP 965
Score = 58.2 bits (139), Expect = 1e-08
Identities = 36/92 (39%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
GK+GT G PG G PG G PG G G+ G+ G GA G G+ G G
Sbjct: 1033 GKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPG----------- 1081
Query: 189 XXXXXXXXXXFPGDNGP---PGPIGLPGRDGP 275
PG+ GP GPIG+PGR GP
Sbjct: 1082 ----PPGPAGSPGERGPAGAAGPIGIPGRPGP 1109
Score = 57.8 bits (138), Expect = 1e-08
Identities = 33/88 (37%), Positives = 36/88 (40%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG G GP G G G VG PG G G G+ GD+G+ G
Sbjct: 1114 GPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDK 1173
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GP GPIG PG G
Sbjct: 1174 GEQGP------PGPTGPQGPIGQPGPSG 1195
Score = 57.8 bits (138), Expect = 1e-08
Identities = 33/95 (34%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGD---PGDRGQSGNIXXXX 173
+DG G VG PG G GP G G G +G PG +G G +G+ PG G G I
Sbjct: 1133 RDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPG 1192
Query: 174 XXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
G G GP G PG GP+
Sbjct: 1193 PSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPV 1227
Score = 57.4 bits (137), Expect = 2e-08
Identities = 34/89 (38%), Positives = 37/89 (41%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
DG G+ G G PG PGP G PG G G PG +G G G G G +G
Sbjct: 1332 DGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGP--- 1388
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GPPGP G GR G
Sbjct: 1389 ------------PGKRGPPGPAGPEGRQG 1405
Score = 57.0 bits (136), Expect = 3e-08
Identities = 36/102 (35%), Positives = 42/102 (41%), Gaps = 12/102 (11%)
Frame = +3
Query: 3 KDGKDGTVGRP------------GSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRG 146
+ G G++G P G+PGKPGP G G G G RG G G PG +G
Sbjct: 878 RQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQ---RGPTGPRGERGPRGITGKPGPKG 934
Query: 147 QSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
SG FPG GPPGP PG+DG
Sbjct: 935 NSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGP---PGKDG 973
Score = 56.6 bits (135), Expect = 3e-08
Identities = 33/101 (32%), Positives = 42/101 (41%), Gaps = 9/101 (8%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPG---------DRGQSG 155
K+G G G G PG GP+G+PG G G G+RG G +G+ G D G G
Sbjct: 767 KEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKG 826
Query: 156 NIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
+ G NG PGP+G PG G +
Sbjct: 827 DRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKL 867
Score = 56.2 bits (134), Expect = 4e-08
Identities = 32/89 (35%), Positives = 38/89 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G +G PG PG PG G G +G G PG G+ G RG PG G G
Sbjct: 862 GEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGER 921
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G++G GP G PG GP
Sbjct: 922 GPRGITGKPGPKGNSGGDGPAGPPGERGP 950
Score = 55.1 bits (131), Expect = 1e-07
Identities = 35/95 (36%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G G PGP G PG G G+ G RG G G GDRG G
Sbjct: 586 GDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHR 645
Query: 189 XXXXXXXXXXFP------GDNGPPGPIGLPGRDGP 275
P GD+G GP GLPG+ GP
Sbjct: 646 GDPGPSGPPGPPGDDGERGDDGEVGPRGLPGKPGP 680
Score = 55.1 bits (131), Expect = 1e-07
Identities = 34/89 (38%), Positives = 37/89 (41%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG PG+ G G G MG G PG RG GA G G +G G I
Sbjct: 1225 GPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEK 1284
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG+ G PGP G G GP
Sbjct: 1285 GE---------PGEAGEPGPSGRSGPPGP 1304
Score = 54.3 bits (129), Expect = 2e-07
Identities = 37/110 (33%), Positives = 41/110 (37%), Gaps = 21/110 (19%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGK---FGARGD---------------- 131
G G G PG G GP+G PG G G PG RG+ FG +GD
Sbjct: 1171 GDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQ 1230
Query: 132 --PGDRGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG G+ G PG GP GP G PG DGP
Sbjct: 1231 GLPGPPGEKGETGDVGQMGP------------PGPPGPRGPSGAPGADGP 1268
Score = 53.9 bits (128), Expect = 2e-07
Identities = 33/88 (37%), Positives = 37/88 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG G GP G G G G PG RG+ G+ G G GQ+G
Sbjct: 577 GSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLA 636
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG +GPPGP PG DG
Sbjct: 637 GLPGEKGHRGDPGPSGPPGP---PGDDG 661
Score = 53.9 bits (128), Expect = 2e-07
Identities = 34/91 (37%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGP---LGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXX 179
G G G PG+ G PGP +G PG G +G PG+ G GA G PG G+ G
Sbjct: 718 GPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEG-------- 769
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G GP GPIG PG G
Sbjct: 770 -------PPGEKGGQGPPGPQGPIGYPGPRG 793
Score = 53.9 bits (128), Expect = 2e-07
Identities = 32/89 (35%), Positives = 38/89 (42%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
+G+ G G G G GP G G +G G PG G G RG PG G+ G
Sbjct: 1401 EGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQG---------- 1450
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG +GPPGP+G PG G
Sbjct: 1451 --------LPGSPGPDGPPGPMGPPGLPG 1471
Score = 52.8 bits (125), Expect = 5e-07
Identities = 33/90 (36%), Positives = 37/90 (41%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
DG G G G G PGP G PG G G G G+ G RG PG G G +
Sbjct: 633 DGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGKPGPRGLLGPKGP--- 689
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG GPPG G+ G+ GP
Sbjct: 690 ------------PGPPGPPGVTGMDGQPGP 707
Score = 52.4 bits (124), Expect = 6e-07
Identities = 31/90 (34%), Positives = 38/90 (42%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
DG+ G G G G+PGP G G G G PG +G G G+ G G+ G
Sbjct: 702 DGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPG---------- 751
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG G GP G PG++GP
Sbjct: 752 -----------LPGMPGADGPPGHPGKEGP 770
Score = 49.7 bits (117), Expect = 4e-06
Identities = 37/104 (35%), Positives = 41/104 (39%), Gaps = 15/104 (14%)
Frame = +3
Query: 9 GKDGTVGRPGS------PGKPGPLGH------PGWMGTVGNPGVRGKFGA---RGDPGDR 143
GK G G PG+ PGK GP G PG G +G PG RG GA RG G +
Sbjct: 748 GKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTK 807
Query: 144 GQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G+ G PG G GP G GR GP
Sbjct: 808 GEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGP 851
Score = 49.3 bits (116), Expect = 5e-06
Identities = 33/88 (37%), Positives = 35/88 (39%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G +G G PG PG G G PG G G G G+ G G PG RG SG
Sbjct: 1213 GDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSG----------- 1261
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G GPPG IG PG G
Sbjct: 1262 -------APGADGPQGPPGGIGNPGAVG 1282
Score = 48.9 bits (115), Expect = 7e-06
Identities = 34/106 (32%), Positives = 40/106 (37%), Gaps = 16/106 (15%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGP---LGHPGWMGTVGNPGVRGKFGARGDP-------------GD 140
G +G G PG PG GP +G PG G G PG+ G G G P GD
Sbjct: 472 GPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGD 531
Query: 141 RGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
G G + GP GP+GL GR GP+
Sbjct: 532 AGSKGPMVSAQESQAQAILQQARLAL----RGPAGPMGLTGRPGPV 573
Score = 48.5 bits (114), Expect = 9e-06
Identities = 31/91 (34%), Positives = 34/91 (37%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
+ G G G PG G GP G G +G G PG+ G G G PG G G
Sbjct: 722 QQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGE-------- 773
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G GPPGP G G GP
Sbjct: 774 -------------KGGQGPPGPQGPIGYPGP 791
Score = 45.8 bits (107), Expect = 6e-05
Identities = 30/89 (33%), Positives = 37/89 (41%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
+G G G G G+P + PG + G PG G G G PG G +G +
Sbjct: 443 EGIGGPRGEKGQKGEPAII-EPGML-IEGPPGPEGPAGLPGPPGTMGPTGQVGD------ 494
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG+ GPPG GLPG DG
Sbjct: 495 ------------PGERGPPGRPGLPGADG 511
Score = 45.8 bits (107), Expect = 6e-05
Identities = 35/119 (29%), Positives = 41/119 (34%), Gaps = 30/119 (25%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRG-------KFGARGDPGD--------- 140
G G G+ G PG+ GP G PG G G PG G +FG GD G
Sbjct: 484 GTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQE 543
Query: 141 --------------RGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
RG +G + PGD GP GP G+ G GP
Sbjct: 544 SQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGP 602
Score = 28.9 bits (63), Expect = 7.5
Identities = 24/80 (30%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
Frame = +3
Query: 39 SPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXXXXXXXXXXXX 218
SP + GP G P T+ G G RG+ G +G+ I
Sbjct: 426 SPSEIGP-GMPANQDTI----YEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLP 480
Query: 219 FP-GDNGPPGPIGLPGRDGP 275
P G GP G +G PG GP
Sbjct: 481 GPPGTMGPTGQVGDPGERGP 500
>sp|P12107|CA1B_HUMAN Collagen alpha 1(XI) chain precursor
Length = 1806
Score = 74.3 bits (181), Expect = 2e-13
Identities = 63/198 (31%), Positives = 75/198 (37%), Gaps = 28/198 (14%)
Frame = +3
Query: 3 KDGKDGTVGRPG------SPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIX 164
+DG G +G PG PG G GHPG +G +G PG +G+ G RG PG +G G
Sbjct: 1427 QDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKG 1486
Query: 165 XXXXXXXXXXXXXXXXXXFPGDNGP------PGPIGLPGRDGPIXXXXXXXXXXXXXXXX 326
PG GP GP G G G
Sbjct: 1487 DGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGPPGPPGEVIQPL 1546
Query: 327 XXATFVPVRTIRRDMLAD-DANAAKY-------------LGSDI--IKKPLGTQELPART 458
+ R M AD D N Y L DI +K P+GTQ PART
Sbjct: 1547 PILSSKKTRRHTEGMQADADDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPART 1606
Query: 459 CKHLFDSDPNFIDGYYYI 512
CK L S P+F DG Y+I
Sbjct: 1607 CKDLQLSHPDFPDGEYWI 1624
Score = 65.5 bits (158), Expect = 7e-11
Identities = 37/91 (40%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPG---PLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXX 179
G+ G G PG PG+ G P G G G G PG G GA+G PGD G GN
Sbjct: 1255 GEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGN------- 1307
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
FPGD GPPG +G G+DG
Sbjct: 1308 --------PGPVGFPGDPGPPGELGPAGQDG 1330
Score = 63.9 bits (154), Expect = 2e-10
Identities = 36/93 (38%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
+G DG G PGS G G +G G G GNPG G+ G G G+RG+ G
Sbjct: 1233 NGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGP 1292
Query: 186 XXXXXXXXXXXFPGDNGP---PGPIGLPGRDGP 275
PGD+GP PGP+G PG GP
Sbjct: 1293 PGAKGP------PGDDGPKGNPGPVGFPGDPGP 1319
Score = 61.6 bits (148), Expect = 1e-09
Identities = 38/104 (36%), Positives = 45/104 (43%), Gaps = 15/104 (14%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLG------------HPGWMGTVGNPGVRGKFGARGDPGDRGQS 152
G+DG +G G PG+ GP G PG G G PG +G G +G+PG GQ
Sbjct: 634 GEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQ 693
Query: 153 GNIXXXXXXXXXXXXXXXXXXXFPGDNGP---PGPIGLPGRDGP 275
GN PG+ GP PG GLPG DGP
Sbjct: 694 GNPGPQGLPGPQGPIGP------PGEKGPQGKPGLAGLPGADGP 731
Score = 60.1 bits (144), Expect = 3e-09
Identities = 34/89 (38%), Positives = 38/89 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
GK G G PG PG+ GP G G+ G G G +G G G PG RGQ G
Sbjct: 835 GKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGAR 894
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G +GPPGP G G GP
Sbjct: 895 GPTGKPGPKGTSGGDGPPGPPGERGPQGP 923
Score = 60.1 bits (144), Expect = 3e-09
Identities = 35/89 (39%), Positives = 39/89 (43%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G DG G PG G GP G G+ G G PG GK G G PG RG++G
Sbjct: 907 GGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETG----------- 955
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
F G GPPGP G+ G GP
Sbjct: 956 ----------FQGKTGPPGPGGVVGPQGP 974
Score = 59.7 bits (143), Expect = 4e-09
Identities = 37/89 (41%), Positives = 39/89 (43%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG PG GP+G PG G G PG RG+ G G GD G G
Sbjct: 1141 GGKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARG----------- 1189
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
FP GPPGPIGL G GP
Sbjct: 1190 ----------FP---GPPGPIGLQGLPGP 1205
Score = 59.3 bits (142), Expect = 5e-09
Identities = 37/100 (37%), Positives = 42/100 (42%), Gaps = 12/100 (12%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGH------PGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXX 170
G G VG G G+ GP+G PG G G PG GK GA+GDPG +G SG
Sbjct: 964 GPGGVVGPQGPTGETGPIGERGYPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPA 1023
Query: 171 XXXXXXXXXXXXXXXXFP------GDNGPPGPIGLPGRDG 272
P G GPPGP+G PG G
Sbjct: 1024 GLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERG 1063
Score = 58.2 bits (139), Expect = 1e-08
Identities = 33/92 (35%), Positives = 38/92 (41%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
KDG G G PG G PG G PG G G G G G+ G+ G G +G I
Sbjct: 1019 KDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLRGRPG 1078
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
PG+ GP GP G G GP+
Sbjct: 1079 PQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPV 1110
Score = 57.0 bits (136), Expect = 3e-08
Identities = 33/91 (36%), Positives = 41/91 (45%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
K+G+ G G G PG GP+G+PG G G GVRG G++G+ G+ G G
Sbjct: 737 KEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPG--------- 787
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
GD G G IG G DGP
Sbjct: 788 ------FKGDMGLKGDRGEVGQIGPRGEDGP 812
Score = 57.0 bits (136), Expect = 3e-08
Identities = 34/88 (38%), Positives = 35/88 (39%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G DG G PG G PG G PG +G G GV G G GDPG G G
Sbjct: 1300 GDDGPKGNPGPVGFPGDPGPPGELGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGP- 1358
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GPPG G GR G
Sbjct: 1359 -----------PGKRGPPGAAGAEGRQG 1375
Score = 56.6 bits (135), Expect = 3e-08
Identities = 33/88 (37%), Positives = 38/88 (43%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG G GP G G G VG PG G G+ G+ GD+G+ G
Sbjct: 1084 GPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGE---------- 1133
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G+NGPPGP GL G G
Sbjct: 1134 --PGQKGSKGGKGENGPPGPPGLQGPVG 1159
Score = 56.2 bits (134), Expect = 4e-08
Identities = 33/94 (35%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
K+G G G G GK GP G G+ G G PG +G G +G G +G G +
Sbjct: 1004 KEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERG 1063
Query: 183 XXXXXXXXXXXXFPGDNGPPGPI---GLPGRDGP 275
PG GPPGP G PG GP
Sbjct: 1064 SAGTAGPIGLRGRPGPQGPPGPAGEKGAPGEKGP 1097
Score = 56.2 bits (134), Expect = 4e-08
Identities = 36/101 (35%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKP------------GPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQS 152
G++G VG G PG P GP G PG +G+VG G +G+ G G+PG G++
Sbjct: 1210 GENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEA 1269
Query: 153 GNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G PG GPPG G PG DGP
Sbjct: 1270 G------VGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGP 1304
Score = 56.2 bits (134), Expect = 4e-08
Identities = 34/91 (37%), Positives = 39/91 (42%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
+DG G G G PG+PGP G G G G PG RG GA G G +G+ G
Sbjct: 1328 QDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKG--------- 1378
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG GP GP G G+ GP
Sbjct: 1379 ---AKGEAGAEGPPGKTGPVGPQGPAGKPGP 1406
Score = 55.8 bits (133), Expect = 6e-08
Identities = 33/88 (37%), Positives = 37/88 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G G G PG GP+G PG G G PG+ G GA G PG G+ G
Sbjct: 691 GQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGAL--- 747
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G GP GPIG PG G
Sbjct: 748 ------------GPPGPQGPIGYPGPRG 763
Score = 55.8 bits (133), Expect = 6e-08
Identities = 30/89 (33%), Positives = 36/89 (40%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G+ G PG PG G G+ G G PG G G +G G+ G G
Sbjct: 934 GPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGYPGPPGPP 993
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G G PGP G+ G+DGP
Sbjct: 994 GEQGLPGAAGKEGAKGDPGPQGISGKDGP 1022
Score = 54.7 bits (130), Expect = 1e-07
Identities = 34/93 (36%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGA---RGDPGDRGQSGNIXXXXXX 179
G G G G PG GP G G G G PG RG+ GA RG PG+ G G+
Sbjct: 547 GSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLP 606
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
G GPPG G+ G DG I
Sbjct: 607 GLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEI 639
Score = 54.3 bits (129), Expect = 2e-07
Identities = 32/90 (35%), Positives = 40/90 (44%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+DG G+PG PG G G PG G G PG G G +G+ G +G++G
Sbjct: 1336 GEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPV 1395
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
G G PGP GL G GP+
Sbjct: 1396 GPQ---------GPAGKPGPEGLRGIPGPV 1416
Score = 53.9 bits (128), Expect = 2e-07
Identities = 32/91 (35%), Positives = 39/91 (42%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
+DG +G GR G G PGP G G G +G PG+ G G +G G G G
Sbjct: 809 EDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPG--------- 859
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
FPG NG G G+ G+ GP
Sbjct: 860 ------------FPGANGEKGARGVAGKPGP 878
Score = 53.1 bits (126), Expect = 4e-07
Identities = 32/91 (35%), Positives = 38/91 (41%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
+ G DG G PG PG G G G G G+ G RG+ G +G PG G G
Sbjct: 581 RPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDG--------- 631
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G++G GP GLPG GP
Sbjct: 632 ------------MRGEDGEIGPRGLPGEAGP 650
Score = 53.1 bits (126), Expect = 4e-07
Identities = 34/88 (38%), Positives = 37/88 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G G GS G GP G PG GT G G G G RG G +G G
Sbjct: 880 GQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVG----------- 928
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
FPG GPPGP PG+DG
Sbjct: 929 ----------FPGPKGPPGP---PGKDG 943
Score = 52.0 bits (123), Expect = 8e-07
Identities = 36/104 (34%), Positives = 42/104 (40%), Gaps = 15/104 (14%)
Frame = +3
Query: 9 GKDGTVGRPGS------PGKPGPLGHPGWMGTVGNPGVRGKFGAR---------GDPGDR 143
GK G GRPG+ PG+PG G G+ G G PG +G G R GD G R
Sbjct: 574 GKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMR 633
Query: 144 GQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G+ G I PG G PG G+ G GP
Sbjct: 634 GEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGP 677
Score = 50.4 bits (119), Expect = 2e-06
Identities = 33/90 (36%), Positives = 35/90 (38%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
+ G G G G G PGP G PG G G G RG G G GDRG G
Sbjct: 554 ESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDG--------- 604
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G+ GP GP G PG DG
Sbjct: 605 ---LPGLPGDKGHRGERGPQGPPGPPGDDG 631
Score = 49.7 bits (117), Expect = 4e-06
Identities = 31/90 (34%), Positives = 35/90 (38%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG PGK GP G G G G G +G+ GA G PG G G
Sbjct: 1348 GPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPE 1407
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
G+ G PG G G GP+
Sbjct: 1408 GLRGIPGPV---GEQGLPGAAGQDGPPGPM 1434
Score = 49.3 bits (116), Expect = 5e-06
Identities = 33/97 (34%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDR-------GQSGNIXX 167
G G +G PG G GP G PG G G PG+ G G G PG G G+
Sbjct: 448 GPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGP 507
Query: 168 XXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
GPPGP+GL GR GP+
Sbjct: 508 TISAQEAQAQAILQQARI-ALRGPPGPMGLTGRPGPV 543
Score = 48.9 bits (115), Expect = 7e-06
Identities = 29/90 (32%), Positives = 36/90 (40%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
+ G+ G G G+ G PG G G G G PG G G G G++G G
Sbjct: 1373 RQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPG--------- 1423
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G +GPPGP+G PG G
Sbjct: 1424 ------------AAGQDGPPGPMGPPGLPG 1441
Score = 48.5 bits (114), Expect = 9e-06
Identities = 29/76 (38%), Positives = 31/76 (40%)
Frame = +3
Query: 45 GKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXXXXXXXXXXXXFP 224
G PGP+G G G VG PG G G GDPG +G G P
Sbjct: 529 GPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRG------------------VQGPP 570
Query: 225 GDNGPPGPIGLPGRDG 272
G G PG G PG DG
Sbjct: 571 GPTGKPGKRGRPGADG 586
Score = 48.1 bits (113), Expect = 1e-05
Identities = 29/88 (32%), Positives = 32/88 (36%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G G G PG PGP+G G G G G G G G PG G G
Sbjct: 1180 GQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQ 1239
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G+ G PG G PG G
Sbjct: 1240 GPPGSVGSVGGVGEKGEPGEAGNPGPPG 1267
Score = 47.4 bits (111), Expect = 2e-05
Identities = 30/90 (33%), Positives = 36/90 (40%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
+DG G G G G G +G G G G G +G+ G GDPG GQ+G
Sbjct: 782 EDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGE-------- 833
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
+PG GP G G PG G
Sbjct: 834 -KGKLGVPGLPGYPGRQGPKGSTGFPGFPG 862
>sp|P08122|CO4A2_MOUSE Collagen alpha 2(IV) chain precursor
Length = 1707
Score = 71.2 bits (173), Expect = 1e-12
Identities = 37/87 (42%), Positives = 42/87 (48%)
Frame = +3
Query: 15 DGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXXXX 194
+G G PG PG PGP G G G G PG G+ G +G PGD G+ G
Sbjct: 678 EGPTGSPGQPGPPGPTGAKGVRGMPGFPGASGEQGLKGFPGDPGREG---FPGPPGFMGP 734
Query: 195 XXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG +GPPGPIGLPG GP
Sbjct: 735 RGSKGTTGLPGPDGPPGPIGLPGPAGP 761
Score = 57.8 bits (138), Expect = 1e-08
Identities = 33/88 (37%), Positives = 39/88 (44%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G VG G PG+PGP+G G MG G PG G G +G PG+RG
Sbjct: 187 GEPGLVGYQGPPGRPGPIGQMGPMGAPGRPGPPGPPGPKGQPGNRG-------------- 232
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
F G G G IG PG +G
Sbjct: 233 --------LGFYGQKGEKGDIGQPGPNG 252
Score = 57.4 bits (137), Expect = 2e-08
Identities = 39/96 (40%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Frame = +3
Query: 3 KDGKDGTVGRPGSP-----GKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXX 167
+DG DG G PG P G PG G PG GT G PG G G +G PG +G+ G
Sbjct: 574 RDGLDGFPGLPGPPGDGIKGPPGDAGLPGVPGTKGFPGDIGPPG-QGLPGPKGRRG---- 628
Query: 168 XXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
FPGD G PGP G PG GP
Sbjct: 629 -----------------FPGDAGLPGPPGFPGPPGP 647
Score = 56.2 bits (134), Expect = 4e-08
Identities = 33/88 (37%), Positives = 38/88 (43%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G+PG G PG G PG+ G+ G PG+ G G G PG GQ G
Sbjct: 780 GDAGLPGQPGLKGLPGETGAPGFRGSQGMPGMPGLKGQPGFPGPSGQPGQ---------- 829
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
FPG G GP+G PG G
Sbjct: 830 --SGPPGQHAFPGTPGREGPLGQPGSPG 855
Score = 54.3 bits (129), Expect = 2e-07
Identities = 35/107 (32%), Positives = 39/107 (36%), Gaps = 19/107 (17%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGN-------------------PGVRGKFGARGD 131
G +G VG PG G PG G GW G G+ PGV G+ G +GD
Sbjct: 452 GSEGRVGYPGPSGFPGTRGQKGWKGEAGDCQCGQVIGGLPGLPGPKGFPGVNGELGKKGD 511
Query: 132 PGDRGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
GD G G FPG G PG G PG G
Sbjct: 512 QGDPGLHG------------------IPGFPGFKGAPGVAGAPGPKG 540
Score = 53.1 bits (126), Expect = 4e-07
Identities = 31/90 (34%), Positives = 39/90 (43%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
+ G G PG+PG+ GPLG PG +PG+ G G RG+PGD G G +
Sbjct: 829 QSGPPGQHAFPGTPGREGPLGQPG------SPGLGGLPGDRGEPGDPGVPGPVGMKGLSG 882
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG G G G+PG G
Sbjct: 883 DRGDAGMSGERGHPGSPGFKGMAGMPGIPG 912
Score = 53.1 bits (126), Expect = 4e-07
Identities = 34/98 (34%), Positives = 40/98 (40%), Gaps = 10/98 (10%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G GR G PG G G PG G G PG+RG G G PG +G G+
Sbjct: 1156 GPQGEPGRIGIPGDKGDFGWPGVPGLPGFPGIRGISGLHGLPGTKGFPGS---------- 1205
Query: 189 XXXXXXXXXXFPGDNGP----------PGPIGLPGRDG 272
FPG G PGP+G+PG+ G
Sbjct: 1206 PGVDAHGDPGFPGPTGDRGDRGEANTLPGPVGVPGQKG 1243
Score = 52.4 bits (124), Expect = 6e-07
Identities = 33/88 (37%), Positives = 38/88 (43%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G PG G G G G +G PG+ G GA+G PG +GQ+G
Sbjct: 1099 GLKGERGITGIPGLKGFFGEKGAAGDIGFPGITGMAGAQGSPGLKGQTG----------- 1147
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
FPG G GP G PGR G
Sbjct: 1148 ----------FPGLTGLQGPQGEPGRIG 1165
Score = 52.0 bits (123), Expect = 8e-07
Identities = 31/88 (35%), Positives = 37/88 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG PG PGP+G G G G+ G+ G+ G G PG +G +G
Sbjct: 858 GLPGDRGEPGDPGVPGPVGMKGLSGDRGDAGMSGERGHPGSPGFKGMAG----------- 906
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG G G G PG DG
Sbjct: 907 ----------MPGIPGQKGDRGSPGMDG 924
Score = 51.6 bits (122), Expect = 1e-06
Identities = 32/85 (37%), Positives = 35/85 (41%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G VG PG G+PG LG PG G G G G G G GDRG G
Sbjct: 1318 GQKGWVGDPGPQGQPGVLGLPGEKGPKGEQGFMGNTGPSGAVGDRGPKG----------- 1366
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPG 263
FPG G G G+PG
Sbjct: 1367 ----PKGDQGFPGAPGSMGSPGIPG 1387
Score = 51.2 bits (121), Expect = 1e-06
Identities = 34/87 (39%), Positives = 37/87 (42%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
DG G G G PG PG G PG +G G G+ G G RG PGD G G
Sbjct: 589 DGIKGPPGDAGLPGVPGTKGFPGDIGPPGQ-GLPGPKGRRGFPGDAGLPGP--------- 638
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGR 266
PG GPPGP G PG+
Sbjct: 639 ------------PGFPGPPGPPGTPGQ 653
Score = 50.8 bits (120), Expect = 2e-06
Identities = 34/93 (36%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGW---MGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXX 179
G G G PG PG+ GP G PG+ GT G+ G +G G+ G PG G G
Sbjct: 112 GFPGADGIPGHPGQGGPRGRPGYDGCNGTRGDAGPQGPSGSGGFPGLPGPQGPKGQKGEP 171
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
PG+ G G G PGR GPI
Sbjct: 172 YALSKEDRDKYRGEPGEPGLVGYQGPPGRPGPI 204
Score = 50.8 bits (120), Expect = 2e-06
Identities = 32/89 (35%), Positives = 37/89 (41%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G VG PG G G G PG G PG++G G+ G G GQ G +
Sbjct: 1273 GSPGDVGAPGIFGLQGYQGPPGPPGPNALPGIKGDEGSSGAAGFPGQKGWVGD------- 1325
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG G PG +GLPG GP
Sbjct: 1326 -----------PGPQGQPGVLGLPGEKGP 1343
Score = 50.4 bits (119), Expect = 2e-06
Identities = 33/85 (38%), Positives = 35/85 (41%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G PG G GHPG G G PG G G RGD G +G SG+
Sbjct: 103 GDVGARGVSGFPGADGIPGHPGQGGPRGRPGYDGCNGTRGDAGPQGPSGS---------- 152
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPG 263
FPG GP GP G G
Sbjct: 153 --------GGFPGLPGPQGPKGQKG 169
Score = 50.1 bits (118), Expect = 3e-06
Identities = 34/100 (34%), Positives = 38/100 (38%), Gaps = 12/100 (12%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGN---PGVRGKFGARGDPG---------DRGQS 152
G G G G PG PGP G PG G G PG G+ G G PG DRG+
Sbjct: 807 GMPGMPGLKGQPGFPGPSGQPGQSGPPGQHAFPGTPGREGPLGQPGSPGLGGLPGDRGE- 865
Query: 153 GNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PGD G PGP+G+ G G
Sbjct: 866 -----------------------PGDPGVPGPVGMKGLSG 882
Score = 49.3 bits (116), Expect = 5e-06
Identities = 34/97 (35%), Positives = 41/97 (42%), Gaps = 9/97 (9%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGD---------RGQSGNI 161
G +G +G+ G G PG G PG+ G G PGV G G +G GD RGQ G
Sbjct: 501 GVNGELGKKGDQGDPGLHGIPGFPGFKGAPGVAGAPGPKGIKGDSRTITTKGERGQPG-- 558
Query: 162 XXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG +G G G+PGRDG
Sbjct: 559 -------------------IPGVHGMKGDDGVPGRDG 576
Score = 49.3 bits (116), Expect = 5e-06
Identities = 30/85 (35%), Positives = 35/85 (41%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G G PG PG+ G G PG+MG G+ G G G G PG G
Sbjct: 709 GEQGLKGFPGDPGREGFPGPPGFMGPRGSKGTTGLPGPDGPPGPIG-------------- 754
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPG 263
PG GPPG G+PG
Sbjct: 755 ----------LPGPAGPPGDRGIPG 769
Score = 48.9 bits (115), Expect = 7e-06
Identities = 34/91 (37%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVR---GKFGARGDPGDRGQSGNIXXXXXX 179
G+ G VG G G PG G PG G G+ G R G G +GD G RG SG
Sbjct: 61 GQPGAVGPQGYNGPPGLQGFPGLQGRKGDKGERGVPGPTGPKGDVGARGVSG-------- 112
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG G GP G PG DG
Sbjct: 113 -------FPGADGIPGHPGQGGPRGRPGYDG 136
Score = 48.9 bits (115), Expect = 7e-06
Identities = 33/90 (36%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPG--VRGKFGARGDPGDRGQSGNIXXXXXXX 182
G G G G+ G+PG G PG GT G PG V + RG PG+ G G
Sbjct: 358 GARGDPGFQGAHGEPGSRGEPGEPGTAGPPGPSVGDEDSMRGLPGEMGPKG--FSGEPGS 415
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG G PGP G PG DG
Sbjct: 416 PARYLGPPGADGRPGPQGVPGPAGPPGPDG 445
Score = 48.5 bits (114), Expect = 9e-06
Identities = 29/88 (32%), Positives = 35/88 (39%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G +G PG G G G PG G G PG+ G G +G+PG G G+
Sbjct: 1120 GAAGDIGFPGITGMAGAQGSPGLKGQTGFPGLTGLQGPQGEPGRIGIPGDKGDFGWPGVP 1179
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G +G PG G PG G
Sbjct: 1180 GLPGFPGIRGISGLHGLPGTKGFPGSPG 1207
Score = 48.5 bits (114), Expect = 9e-06
Identities = 29/89 (32%), Positives = 37/89 (41%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G + G G G G G PG G VG+PG +G+ G G PG++G G
Sbjct: 1297 GPNALPGIKGDEGSSGAAGFPGQKGWVGDPGPQGQPGVLGLPGEKGPKGE---------- 1346
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
F G+ GP G +G G GP
Sbjct: 1347 --------QGFMGNTGPSGAVGDRGPKGP 1367
Score = 47.8 bits (112), Expect = 2e-05
Identities = 33/95 (34%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGP----LGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXX 173
DG+ G G PG G PGP G G G VG PG G G RG G +G++G+
Sbjct: 426 DGRPGPQGVPGPAGPPGPDGFLFGLKGSEGRVGYPGPSGFPGTRGQKGWKGEAGD----- 480
Query: 174 XXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
G G PGP G PG +G +
Sbjct: 481 ---------CQCGQVIGGLPGLPGPKGFPGVNGEL 506
Score = 47.8 bits (112), Expect = 2e-05
Identities = 36/112 (32%), Positives = 39/112 (34%), Gaps = 24/112 (21%)
Frame = +3
Query: 9 GKDGTVGRPGSPGK------------------------PGPLGHPGWMGTVGNPGVRGKF 116
G GT G PGSPG PGP+G PG G G PG RG
Sbjct: 1195 GLPGTKGFPGSPGVDAHGDPGFPGPTGDRGDRGEANTLPGPVGVPGQKGERGTPGERGPA 1254
Query: 117 GARGDPGDRGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G+ G G G S + G GPPGP LPG G
Sbjct: 1255 GSPGLQGFPGISPPSNISGSPGDVGAPGIFGLQGYQGPPGPPGPNALPGIKG 1306
Score = 47.8 bits (112), Expect = 2e-05
Identities = 31/86 (36%), Positives = 34/86 (39%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G +G G PG PG G PG G G GV G RGD G G G +
Sbjct: 1409 GALGEIGPQGPPGDPGFRGAPGKAGPQGRGGVSAVPGFRGDQGPMGHQGPVGQEGE---- 1464
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGR 266
PG G PG G+PGR
Sbjct: 1465 -----------PGRPGSPGLPGMPGR 1479
Score = 46.6 bits (109), Expect = 3e-05
Identities = 28/86 (32%), Positives = 36/86 (41%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
DG G +G G G PG G G+ G G G+ G+ G +G+ GDRG G
Sbjct: 923 DGFQGMLGLKGRQGFPGTKGEAGFFGVPGLKGLPGEPGVKGNRGDRGPPG---------- 972
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPG 263
G+ G GP+GL G
Sbjct: 973 PPPLILPGMKDIKGEKGDEGPMGLKG 998
Score = 46.2 bits (108), Expect = 5e-05
Identities = 32/89 (35%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Frame = +3
Query: 30 RPGSPGKPGPLGHPGWM---GTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXXXXXX 200
+PG+ G G G PG G G PG RG G G PG +GQ G
Sbjct: 775 QPGTRGDAGLPGQPGLKGLPGETGAPGFRGSQGMPGMPGLKGQPG--------------- 819
Query: 201 XXXXXXFPGDNGPPGP---IGLPGRDGPI 278
PG +GPPG G PGR+GP+
Sbjct: 820 FPGPSGQPGQSGPPGQHAFPGTPGREGPL 848
Score = 45.8 bits (107), Expect = 6e-05
Identities = 34/104 (32%), Positives = 40/104 (38%), Gaps = 16/104 (15%)
Frame = +3
Query: 9 GKDGTVGRPGSP---------GKPGPLGHPGWMGT---VGNPGVRGKFGARGDPGDRGQS 152
G G +G PG+P G PG G PG+ G+ G PGV G FG G GD G
Sbjct: 1029 GVKGDIGVPGTPGLPGFPGVSGPPGITGFPGFTGSRGEKGTPGVAGVFGETGPTGDFGDI 1088
Query: 153 GNI----XXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G+ F G+ G G IG PG G
Sbjct: 1089 GDTVDLPGSPGLKGERGITGIPGLKGFFGEKGAAGDIGFPGITG 1132
Score = 45.4 bits (106), Expect = 8e-05
Identities = 34/106 (32%), Positives = 40/106 (37%), Gaps = 18/106 (16%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPG----------------WMGTVGNPGVRGKFGARGDPGD 140
G G GRPG G PGP G PG + G G PG RG+ G +G+ GD
Sbjct: 421 GPPGADGRPGPQGVPGPAGPPGPDGFLFGLKGSEGRVGYPGPSGFPGTRGQKGWKGEAGD 480
Query: 141 RGQSGNIXXXXXXXXXXXXXXXXXXXF--PGDNGPPGPIGLPGRDG 272
Q G + GD G PG G+PG G
Sbjct: 481 -CQCGQVIGGLPGLPGPKGFPGVNGELGKKGDQGDPGLHGIPGFPG 525
Score = 43.9 bits (102), Expect = 2e-04
Identities = 32/94 (34%), Positives = 34/94 (36%), Gaps = 6/94 (6%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSG------NIXXX 170
G G +G PG G PGP G G+ G G PG G G G PG GQ
Sbjct: 608 GFPGDIGPPGQ-GLPGPKGRRGFPGDAGLPGPPGFPGPPGPPGTPGQRDCDTGVKRPIGG 666
Query: 171 XXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GPPGP G G G
Sbjct: 667 GQQVVVQPGCIEGPTGSPGQPGPPGPTGAKGVRG 700
Score = 43.5 bits (101), Expect = 3e-04
Identities = 31/89 (34%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPG-VRGKFGARGDPGDRGQSGNIXXXXXXXX 185
G G +G G G PG G G+ G G PG ++G G G PG G G
Sbjct: 995 GLKGYLGLKGIQGMPGVPGVSGFPGLPGRPGFIKGVKGDIGVPGTPGLPG---------- 1044
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
FPG +GPPG G PG G
Sbjct: 1045 -----------FPGVSGPPGITGFPGFTG 1062
Score = 43.5 bits (101), Expect = 3e-04
Identities = 33/101 (32%), Positives = 39/101 (38%), Gaps = 13/101 (12%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKP----------GPLGH---PGWMGTVGNPGVRGKFGARGDPGDRGQ 149
G G++G PG PG P GP G PG +G +G G G G RG PG G
Sbjct: 1375 GAPGSMGSPGIPGIPQKIAVQPGTLGPQGRRGLPGALGEIGPQGPPGDPGFRGAPGKAGP 1434
Query: 150 SGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G F GD GP G G G++G
Sbjct: 1435 QGR------------GGVSAVPGFRGDQGPMGHQGPVGQEG 1463
Score = 43.1 bits (100), Expect = 4e-04
Identities = 33/105 (31%), Positives = 41/105 (39%), Gaps = 15/105 (14%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDP------GDRGQSGNIXX 167
DG G G+ G G+P G+ G GT G+ G +G G+ G P G +GQ G
Sbjct: 117 DGIPGHPGQGGPRGRP---GYDGCNGTRGDAGPQGPSGSGGFPGLPGPQGPKGQKGEPYA 173
Query: 168 XXXXXXXXXXXXXXXXXFPGDNGPP---------GPIGLPGRDGP 275
G GPP GP+G PGR GP
Sbjct: 174 LSKEDRDKYRGEPGEPGLVGYQGPPGRPGPIGQMGPMGAPGRPGP 218
Score = 42.4 bits (98), Expect = 7e-04
Identities = 32/88 (36%), Positives = 37/88 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G T+ G G+P G PG G G+ GV G+ G G PG G G+
Sbjct: 543 GDSRTITTKGERGQP---GIPGVHGMKGDDGVPGRDGLDGFPGLPGPPGD-GIKGPPGDA 598
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
FPGD GPPG GLPG G
Sbjct: 599 GLPGVPGTKGFPGDIGPPGQ-GLPGPKG 625
Score = 42.0 bits (97), Expect = 9e-04
Identities = 32/96 (33%), Positives = 37/96 (38%), Gaps = 11/96 (11%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGW---------MGTVGNPGVRGKFGARGDPGDRGQSGNI 161
G G G PG PG+ G G PG G G PG +G+ G G PG +G G
Sbjct: 900 GFKGMAGMPGIPGQKGDRGSPGMDGFQGMLGLKGRQGFPGTKGEAGFFGVPGLKGLPGEP 959
Query: 162 XXXXXXXXXXXXXXXXXXXFPGDNGPPG--PIGLPG 263
GD GPPG P+ LPG
Sbjct: 960 GVKGNR---------------GDRGPPGPPPLILPG 980
Score = 42.0 bits (97), Expect = 9e-04
Identities = 31/96 (32%), Positives = 35/96 (36%), Gaps = 7/96 (7%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPG-------PLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXX 167
G G G PG PG+PG +G PG G G PGV G G G PG G G
Sbjct: 1010 GVPGVSGFPGLPGRPGFIKGVKGDIGVPGTPGLPGFPGVSGPPGITGFPGFTGSRG---- 1065
Query: 168 XXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
+ G PG G+ G GP
Sbjct: 1066 --------------------EKGTPGVAGVFGETGP 1081
Score = 41.6 bits (96), Expect = 0.001
Identities = 31/91 (34%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +3
Query: 9 GKDGTVGRPG--SPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
G +G G PG S G+ G +G PG G PG+ G+ G G G RG G
Sbjct: 277 GDEGEQGIPGVISKGEEGIMGFPGIRGF---PGLDGEKGVVGQKGSRGLDG--------- 324
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
F G +GP GP G G GP
Sbjct: 325 ------------FQGPSGPRGPKGERGEQGP 343
Score = 40.4 bits (93), Expect = 0.002
Identities = 33/102 (32%), Positives = 39/102 (38%), Gaps = 13/102 (12%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPL---GHP----GWMGTVGNPGVRGKFGARGDPGDRGQSG--NI 161
G G G G G PGP HP G G G G G+ G+RG+PG+ G +G
Sbjct: 330 GPRGPKGERGEQGPPGPSVYSPHPSLAKGARGDPGFQGAHGEPGSRGEPGEPGTAGPPGP 389
Query: 162 XXXXXXXXXXXXXXXXXXXFPGDNGPP----GPIGLPGRDGP 275
F G+ G P GP G GR GP
Sbjct: 390 SVGDEDSMRGLPGEMGPKGFSGEPGSPARYLGPPGADGRPGP 431
Score = 36.6 bits (83), Expect = 0.036
Identities = 31/95 (32%), Positives = 34/95 (35%), Gaps = 7/95 (7%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGW---MGTVGNPGVRGKF----GARGDPGDRGQSGNIXX 167
G G VG G G G G PG MG+ G PG+ K G G G RG G +
Sbjct: 1354 GPSGAVGDRGPKGPKGDQGFPGAPGSMGSPGIPGIPQKIAVQPGTLGPQGRRGLPGALGE 1413
Query: 168 XXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG G PG G GR G
Sbjct: 1414 IGPQGPPGD---------PGFRGAPGKAGPQGRGG 1439
Score = 28.9 bits (63), Expect = 7.5
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVG 92
G G G PG PG PG G PG ++G
Sbjct: 1457 GPVGQEGEPGRPGSPGLPGMPGRSVSIG 1484
>sp|P04258|CA13_BOVIN Collagen alpha 1(III) chain
Length = 1049
Score = 70.5 bits (171), Expect = 2e-12
Identities = 41/95 (43%), Positives = 41/95 (43%), Gaps = 6/95 (6%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWM---GTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXX 179
G G GRPG PG PGP G PG M G GN G GK G RG PG G G
Sbjct: 399 GSQGETGRPGPPGSPGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPAGKNGET 458
Query: 180 XXXXXXXXXXXXXFPGDNGPPGP---IGLPGRDGP 275
GD GPPGP GLPG GP
Sbjct: 459 GPQGPPGPTGPSGDKGDTGPPGPQGLQGLPGTSGP 493
Score = 68.2 bits (165), Expect = 1e-11
Identities = 36/89 (40%), Positives = 40/89 (44%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG+PG PGP GH G +G+ G G RG G G PG G SG+
Sbjct: 951 GHRGFPGNPGAPGSPGPAGHQGAVGSPGPAGPRGPVGPSGPPGKDGASGHPGPIGPPGPR 1010
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG G PGP G PG GP
Sbjct: 1011 GNRGERGSEGSPGHPGQPGPPGPPGAPGP 1039
Score = 61.2 bits (147), Expect = 1e-09
Identities = 36/99 (36%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNP---------GVRGKFGARGDPGDRGQSG 155
++GK G G+ G G PGP G PG GT G P G+ G+ GA G GDRG++G
Sbjct: 823 ENGKPGPSGQNGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGAPGAKGDRGENG 882
Query: 156 NIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
+ PG GPPGP+G G+ G
Sbjct: 883 S---------------PGAPGAPGHPGPPGPVGPAGKSG 906
Score = 60.5 bits (145), Expect = 2e-09
Identities = 35/88 (39%), Positives = 37/88 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
GKDG G G G PGP G PG G G PGV G G RG PG+R
Sbjct: 600 GKDGPRGPTGPIGPPGPAGQPGDKGESGAPGVPGIAGPRGGPGER--------------- 644
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G+ GPPGP G PG G
Sbjct: 645 ------------GEQGPPGPAGFPGAPG 660
Score = 59.3 bits (142), Expect = 5e-09
Identities = 36/101 (35%), Positives = 42/101 (41%), Gaps = 12/101 (11%)
Frame = +3
Query: 6 DGKDGTVGRPGSPG------------KPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQ 149
DG++G G PG+PG PGP+G G G G PG+ G GARG+ G RG
Sbjct: 113 DGRNGEKGEPGAPGLKGENGVPGEDGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGS 172
Query: 150 SGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G PG GPPG G PG G
Sbjct: 173 DGQ---------------------PGPPGPPGTAGFPGSPG 192
Score = 58.9 bits (141), Expect = 7e-09
Identities = 34/91 (37%), Positives = 39/91 (42%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
DG G+ G+PG PG PG G PG G G G G G+ G PG RG+ G
Sbjct: 167 DGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSSGAPGQRGEPG---PQGHAGA 223
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
PG G GP G+PG G I
Sbjct: 224 PGPPGPPGSDGSPGGKGEMGPAGIPGAPGLI 254
Score = 58.9 bits (141), Expect = 7e-09
Identities = 35/88 (39%), Positives = 41/88 (46%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G+ GSPG+PG G PG G G PG RG GA G PG++G G+
Sbjct: 303 GPKGEDGKDGSPGEPGANGLPGAAGERGVPGFRGPAGANGLPGEKGPPGD---------- 352
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GP G G PGR+G
Sbjct: 353 --------RGGPGPAGPRGVAGEPGRNG 372
Score = 57.8 bits (138), Expect = 1e-08
Identities = 35/89 (39%), Positives = 37/89 (41%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
GKDG GRPG PG G G PG G G PG G G RG G G+ G
Sbjct: 72 GKDGESGRPGRPGPRGFPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGE---------- 121
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G+NG PG G PG GP
Sbjct: 122 -----PGAPGLKGENGVPGEDGAPGPMGP 145
Score = 57.4 bits (137), Expect = 2e-08
Identities = 33/90 (36%), Positives = 42/90 (46%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
KDG+ G GRPG G PGP G G G G PG++G G G G++G+ G
Sbjct: 73 KDGESGRPGRPGPRGFPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGEPG--------- 123
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG++G PGP+G G G
Sbjct: 124 ---APGLKGENGVPGEDGAPGPMGPRGAPG 150
Score = 57.4 bits (137), Expect = 2e-08
Identities = 34/90 (37%), Positives = 41/90 (45%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G+ G PG+ G PG G PG G+ GNPG G GA G G G G+
Sbjct: 705 GERGSPGGPGAAGFPGGRGPPGPPGSNGNPGPPGSSGAPGKDGPPGPPGSNGAPGSPGIS 764
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
PG+ G PGP G PG GP+
Sbjct: 765 GPKGDSGP---PGERGAPGPQGPPGAPGPL 791
Score = 57.4 bits (137), Expect = 2e-08
Identities = 32/89 (35%), Positives = 37/89 (41%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
+G G G G+PGK GP G PG G G+PG+ G G G PG+RG G
Sbjct: 731 NGNPGPPGSSGAPGKDGPPGPPGSNGAPGSPGISGPKGDSGPPGERGAPGPQGPPGAPGP 790
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G G PG G PG G
Sbjct: 791 LGIAGLTGARGLAGPPGMPGARGSPGPQG 819
Score = 57.4 bits (137), Expect = 2e-08
Identities = 35/88 (39%), Positives = 38/88 (43%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G G G PG PGPLG G G G G G GARG PG +G G
Sbjct: 774 GERGAPGPQGPPGAPGPLGIAGLTGARGLAGPPGMPGARGSPGPQGIKGENGKPGPSGQN 833
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G+ GPPGP GLPG G
Sbjct: 834 ------------GERGPPGPQGLPGLAG 849
Score = 57.0 bits (136), Expect = 3e-08
Identities = 33/91 (36%), Positives = 38/91 (41%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
+DG G +G G+PG+ G G PG G GN G RG G G PG G +G
Sbjct: 136 EDGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKG 195
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG G PGP G G GP
Sbjct: 196 EVGPAGSPGSSGAPGQRGEPGPQGHAGAPGP 226
Score = 56.6 bits (135), Expect = 3e-08
Identities = 32/88 (36%), Positives = 36/88 (40%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG+PG GP G PG G G PG G G G G+ G+ G
Sbjct: 33 GTSGHPGAPGAPGYQGPPGEPGQAGPAGPPGPPGAIGPSGKDGESGRPGR---------- 82
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
FPG G GP G+PG G
Sbjct: 83 -----PGPRGFPGPPGMKGPAGMPGFPG 105
Score = 56.6 bits (135), Expect = 3e-08
Identities = 33/92 (35%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDP---GDRGQSGNIXXXXXX 179
G G G G PG+ G G PG G G+PG RG+ G G P G +G+ G
Sbjct: 258 GPPGPPGTNGVPGQRGAAGEPGKNGAKGDPGPRGERGEAGSPGIAGPKGEDGKDGSPGEP 317
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG GP G GLPG GP
Sbjct: 318 GANGLPGAAGERGVPGFRGPAGANGLPGEKGP 349
Score = 56.6 bits (135), Expect = 3e-08
Identities = 35/99 (35%), Positives = 39/99 (39%), Gaps = 9/99 (9%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
+DGKDG+ G PG+ G PG G G G G G G G +G PGDRG G
Sbjct: 307 EDGKDGSPGEPGANGLPGAAGERGVPGFRGPAGANGLPGEKGPPGDRGGPGPAGPRGVAG 366
Query: 183 XXXXXXXXXXXXF---------PGDNGPPGPIGLPGRDG 272
PG NG PGP G G G
Sbjct: 367 EPGRNGLPGGPGLRGIPGSPGGPGSNGKPGPPGSQGETG 405
Score = 56.6 bits (135), Expect = 3e-08
Identities = 34/89 (38%), Positives = 38/89 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G++G G PG G+ G G PG G G PG RG GA G PG RG +G
Sbjct: 495 GENGKPGEPGPKGEAGAPGIPGGKGDSGAPGERGPPGAGGPPGPRGGAGPPGPEGGKGAA 554
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG G PG G PG GP
Sbjct: 555 GPPGPPGSAGTPGLQGMPGERGGPGGPGP 583
Score = 56.2 bits (134), Expect = 4e-08
Identities = 33/89 (37%), Positives = 36/89 (40%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G G PGP G G G+ G PG G G RG PG G +GN
Sbjct: 684 GAAGPAGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGGRGPPGPPGSNGN---------- 733
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
GPPG G PG+DGP
Sbjct: 734 --------------PGPPGSSGAPGKDGP 748
Score = 55.8 bits (133), Expect = 6e-08
Identities = 31/88 (35%), Positives = 37/88 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
GK+G G G PG GP G G G G G++G G G PG+ G+ G
Sbjct: 453 GKNGETGPQGPPGPTGPSGDKGDTGPPGPQGLQGLPGTSGPPGENGKPGEPGPKGEAGAP 512
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG+ GPPG G PG G
Sbjct: 513 GIPGGKGDSGAPGERGPPGAGGPPGPRG 540
Score = 55.8 bits (133), Expect = 6e-08
Identities = 32/88 (36%), Positives = 36/88 (40%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG G G G PG G+ G PG++G G RG PG G G+
Sbjct: 537 GPRGGAGPPGPEGGKGAAGPPGPPGSAGTPGLQGMPGERGGPGGPGPKGDKGEPGSSGVD 596
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G GPPGP G PG G
Sbjct: 597 GAPGKDGPRGPTGPIGPPGPAGQPGDKG 624
Score = 55.8 bits (133), Expect = 6e-08
Identities = 34/101 (33%), Positives = 39/101 (38%), Gaps = 12/101 (11%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGD------------RGQS 152
G G G G G PGP G PG G G PG +G+ GA G+ G+ G +
Sbjct: 636 GPRGGPGERGEQGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPPGAAGPAGGSGPA 695
Query: 153 GNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G FPG GPPGP G G GP
Sbjct: 696 GPPGPQGVKGERGSPGGPGAAGFPGGRGPPGPPGSNGNPGP 736
Score = 55.1 bits (131), Expect = 1e-07
Identities = 34/92 (36%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKF---GARGDPGDRGQSGNIXXXXXX 179
G++G G PG G PG G PG G G PG +G+ G G PG RGQ G +
Sbjct: 369 GRNGLPGGPGLRGIPGSPGGPGSNGKPGPPGSQGETGRPGPPGSPGPRGQPGVMGFPGPK 428
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG GP GP G G GP
Sbjct: 429 GNDGAPGKNGERGGPGGPGPQGPAGKNGETGP 460
Score = 54.3 bits (129), Expect = 2e-07
Identities = 34/89 (38%), Positives = 37/89 (41%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G G PG G PG G G PG +G+ GA G PG +G SG
Sbjct: 474 GDTGPPGPQGLQGLPGTSGPPGENGKPGEPGPKGEAGAPGIPGGKGDSG----------- 522
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG GPPGP G G GP
Sbjct: 523 ----APGERGPPGAGGPPGPRGGAGPPGP 547
Score = 53.5 bits (127), Expect = 3e-07
Identities = 33/91 (36%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGV---RGKFGARGDPGDRGQSGNIXXXXXX 179
G++G G G+PG GP G PG G G PG RG GARG G G G
Sbjct: 129 GENGVPGEDGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFP 188
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG +G PG G PG G
Sbjct: 189 GSPGAKGEVGPAGSPGSSGAPGQRGEPGPQG 219
Score = 53.5 bits (127), Expect = 3e-07
Identities = 35/92 (38%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGW---MGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXX 179
G G G PG PG PG G PG MG G PG G GARG PG G +G
Sbjct: 216 GPQGHAGAPGPPGPPGSDGSPGGKGEMGPAGIPGAPGLIGARGPPGPPGTNG---VPGQR 272
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG G G G PG GP
Sbjct: 273 GAAGEPGKNGAKGDPGPRGERGEAGSPGIAGP 304
Score = 53.5 bits (127), Expect = 3e-07
Identities = 35/103 (33%), Positives = 41/103 (39%), Gaps = 12/103 (11%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGA------RGDPGDRGQSGNIX 164
++G G G PG PG PGP+G G G G G G GA RG PG +G G+
Sbjct: 880 ENGSPGAPGAPGHPGPPGPVGPAGKSGDRGETGPAGPSGAPGPAGSRGPPGPQGPRGDKG 939
Query: 165 XXXXXXXXXXXXXXXXXXFPGDNGPPGP------IGLPGRDGP 275
PG G PGP +G PG GP
Sbjct: 940 ETGERGAMGIKGHRGFPGNPGAPGSPGPAGHQGAVGSPGPAGP 982
Score = 53.1 bits (126), Expect = 4e-07
Identities = 31/90 (34%), Positives = 35/90 (38%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
+G G G PG PG G G G G G PG G G +G+PG G G
Sbjct: 548 EGGKGAAGPPGPPGSAGTPGLQGMPGERGGPGGPGPKGDKGEPGSSGVDGAPGKDGPRGP 607
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PGD G G G+PG GP
Sbjct: 608 TGPIGPPGPAGQPGDKGESGAPGVPGIAGP 637
Score = 52.8 bits (125), Expect = 5e-07
Identities = 33/96 (34%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHP---GWMGTVGNPGV---RGKFGARGDPGDRGQSGNIXX 167
+G G G G PGK G G P G G G+PG+ +G+ G G PG+ G +G
Sbjct: 266 NGVPGQRGAAGEPGKNGAKGDPGPRGERGEAGSPGIAGPKGEDGKDGSPGEPGANGLPGA 325
Query: 168 XXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG+ GPPG G PG GP
Sbjct: 326 AGERGVPGFRGPAGANGLPGEKGPPGDRGGPGPAGP 361
Score = 52.4 bits (124), Expect = 6e-07
Identities = 32/88 (36%), Positives = 34/88 (38%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG PG GP G PG G G PG G GA G G+ G G
Sbjct: 621 GDKGESGAPGVPGIAGPRGGPGERGEQGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEG 680
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G GPPGP G+ G G
Sbjct: 681 GPPGAAGPAGGSGPAGPPGPQGVKGERG 708
Score = 52.4 bits (124), Expect = 6e-07
Identities = 32/90 (35%), Positives = 37/90 (41%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
DG G G PG+ G G G PG G G+PG G G G GDRG++G
Sbjct: 863 DGLPGRDGAPGAKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGETGP--------- 913
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G +G PGP G G GP
Sbjct: 914 ------------AGPSGAPGPAGSRGPPGP 931
Score = 52.0 bits (123), Expect = 8e-07
Identities = 33/94 (35%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGH------PGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXX 170
G G+ G PG G+PGP GH PG G+ G+PG +G+ G G PG G G
Sbjct: 201 GSPGSSGAPGQRGEPGPQGHAGAPGPPGPPGSDGSPGGKGEMGPAGIPGAPGLIG----- 255
Query: 171 XXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G GPPG G+PG+ G
Sbjct: 256 ----------------ARGPPGPPGTNGVPGQRG 273
Score = 51.6 bits (122), Expect = 1e-06
Identities = 34/94 (36%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKP---GPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXX 173
KDG G G G+PG P GP G G G G PG +G GA G G G +G
Sbjct: 745 KDGPPGPPGSNGAPGSPGISGPKGDSGPPGERGAPGPQGPPGAPGPLGIAGLTGARGLAG 804
Query: 174 XXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G+NG PGP G G GP
Sbjct: 805 PPGMPGARGSPGPQGIKGENGKPGPSGQNGERGP 838
Score = 51.2 bits (121), Expect = 1e-06
Identities = 34/92 (36%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +3
Query: 6 DGKDGTVGR--PGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXX 179
D K G G G PG GP G PG GT G+PG G G +G PG+ GQ+G
Sbjct: 6 DVKSGVAGGGIAGYPGPAGPPGPPGPPGTSGHPGAPGAPGYQGPPGEPGQAGPAGPPGPP 65
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G +G G G PGR GP
Sbjct: 66 GAI------------GPSGKDGESGRPGRPGP 85
Score = 49.3 bits (116), Expect = 5e-06
Identities = 30/88 (34%), Positives = 36/88 (40%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G PG+ G G PG G G+PG G G G PG +G++G
Sbjct: 357 GPAGPRGVAGEPGRNGLPGGPGLRGIPGSPGGPGSNGKPGPPGSQGETGR---------- 406
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG G PG +G PG G
Sbjct: 407 -----PGPPGSPGPRGQPGVMGFPGPKG 429
Score = 48.9 bits (115), Expect = 7e-06
Identities = 36/110 (32%), Positives = 42/110 (38%), Gaps = 21/110 (19%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGN------PGVRGK------------FGARGDP 134
G G+ G PG G+ GP G PG G +G PG G GA+GDP
Sbjct: 228 GPPGSDGSPGGKGEMGPAGIPGAPGLIGARGPPGPPGTNGVPGQRGAAGEPGKNGAKGDP 287
Query: 135 GDRGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPI---GLPGRDGP 275
G RG+ G PG NG PG G+PG GP
Sbjct: 288 GPRGERGEAGSPGIAGPKGEDGKDGSPGEPGANGLPGAAGERGVPGFRGP 337
Score = 48.5 bits (114), Expect = 9e-06
Identities = 31/90 (34%), Positives = 35/90 (38%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G+ G G G PG G G+PG G GA G PG G G +
Sbjct: 936 GDKGETGERGAMGIKGHRGFPGNPGAPGSPGPAGHQGAVGSPGPAGPRGPV--------- 986
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
G +GPPG G G GPI
Sbjct: 987 ------------GPSGPPGKDGASGHPGPI 1004
Score = 48.1 bits (113), Expect = 1e-05
Identities = 34/88 (38%), Positives = 35/88 (39%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G GSPG PG GHPG G VG G K G RG+ G G SG
Sbjct: 873 GAKGDRGENGSPGAPGAPGHPGPPGPVGPAG---KSGDRGETGPAGPSG----------- 918
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G GPPGP G G G
Sbjct: 919 -------APGPAGSRGPPGPQGPRGDKG 939
Score = 41.2 bits (95), Expect = 0.001
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNP---GVRGKFGARGDPGDRGQSGNI 161
GKDG G PG G PGP G+ G G+ G+P G G G G PG +G +
Sbjct: 993 GKDGASGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGAGGV 1046
>sp|P05997|CO5A2_HUMAN Collagen alpha 2(V) chain precursor
Length = 1496
Score = 67.8 bits (164), Expect = 1e-11
Identities = 36/90 (40%), Positives = 42/90 (46%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G+PG G PGP G G G VG PG RG+ G G PG G G +
Sbjct: 966 GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGA---- 1021
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
GD GPPGP+G PG +GP+
Sbjct: 1022 -----------TGDKGPPGPVGPPGSNGPV 1040
Score = 64.7 bits (156), Expect = 1e-10
Identities = 36/91 (39%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGK---PGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXX 179
G G G PGS G+ PGP G PG G +G PG G G RGDPG G+ G
Sbjct: 900 GPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGPRGDPGSHGRVGVRGPAGPP 959
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG +GPPGP G G+ G
Sbjct: 960 GGPGDKGDPGEDGQPGPDGPPGPAGTTGQRG 990
Score = 64.3 bits (155), Expect = 2e-10
Identities = 35/90 (38%), Positives = 41/90 (45%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G G PG PG GPLG PG G GNPG++G+ G G G G G
Sbjct: 354 GQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQ---------- 403
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
G+ GPPGP+G PG G I
Sbjct: 404 -----------RGETGPPGPVGSPGLPGAI 422
Score = 63.2 bits (152), Expect = 4e-10
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGN---PGVRGKFGARGDPGDRGQSGNIXXXXX 176
+G G VG PGS G+ GP G G MG +G PG RG+ G +G PG RG G
Sbjct: 308 EGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHG------- 360
Query: 177 XXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GP GP+G+PG G
Sbjct: 361 --------------MPGKPGPMGPLGIPGSSG 378
Score = 62.0 bits (149), Expect = 8e-10
Identities = 35/99 (35%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
+GK G +G PG G+PGP G G G G G+ G G+ GDPG G++GN
Sbjct: 581 EGKLGPLGAPGEDGRPGPPGSIGIKGQPGTMGLPGPKGSNGDPGKPGEAGNPGVPGQRGA 640
Query: 186 XXXXXXXXXXXFP---------GDNGPPGPIGLPGRDGP 275
P G+ GPPGP G G GP
Sbjct: 641 PGKDGKVGPYGPPGPPGLRGERGEQGPPGPTGFQGHPGP 679
Score = 62.0 bits (149), Expect = 8e-10
Identities = 36/94 (38%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
DG+ G G PG PG+ G G PG G G+PG G G G G RG G
Sbjct: 851 DGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQG---------- 900
Query: 186 XXXXXXXXXXXFPGDN---GPPGPIGLPGRDGPI 278
FPG GPPGP G PG GP+
Sbjct: 901 -----PPGATGFPGSAGRVGPPGPAGAPGPAGPL 929
Score = 61.6 bits (148), Expect = 1e-09
Identities = 39/101 (38%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPG---WMGTVGNPGVRGKF---GARGDPGDRGQSGNIXXX 170
G +GT G G+ G PGPLG PG +G G PG RG G+RG+PG RG++G
Sbjct: 783 GAEGTAGNDGAGGLPGPLGPPGPAGLLGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAV 842
Query: 171 XXXXXXXXXXXXXXXXFP------GDNGPPGPIGLPGRDGP 275
P GD G PGP GL G GP
Sbjct: 843 GFAGPQGSDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGP 883
Score = 60.1 bits (144), Expect = 3e-09
Identities = 34/91 (37%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGD---PGDRGQSGNIXXXXXX 179
G G G PG PG PG G PG G G PG G G RG+ PG+RG+ G
Sbjct: 669 GPTGFQGHPGPPGPPGEGGKPGDQGVPGGPGAVGPLGPRGERGNPGERGEPGITGLPGEK 728
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG +G PG G PG G
Sbjct: 729 GMAGGHGPDGPKGSPGPSGTPGDTGPPGLQG 759
Score = 60.1 bits (144), Expect = 3e-09
Identities = 35/88 (39%), Positives = 36/88 (40%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
GK G G G G PGP+G PG G VG PG G G G PG G G
Sbjct: 1014 GKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGE---------- 1063
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
GD G PGP GLPG G
Sbjct: 1064 -----------RGDRGDPGPAGLPGSQG 1080
Score = 59.7 bits (143), Expect = 4e-09
Identities = 33/88 (37%), Positives = 40/88 (45%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G+ G PGSPG G G G G G+PG +G+ G +G+PG G G I
Sbjct: 441 GPPGSAGPPGSPGPQGSTGPQGNSGLPGDPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKR 500
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GPPGP+G G G
Sbjct: 501 GPRGD------PGTLGPPGPVGERGAPG 522
Score = 59.7 bits (143), Expect = 4e-09
Identities = 34/89 (38%), Positives = 39/89 (43%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G+ G PG GP+GH G G G PG +G G +GD GDRG G
Sbjct: 1089 GAPGDAGQRGDPGSRGPIGHLGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQ 1148
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG NG G G+PG GP
Sbjct: 1149 GLPGP------PGPNGEQGSAGIPGPFGP 1171
Score = 59.3 bits (142), Expect = 5e-09
Identities = 35/96 (36%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Frame = +3
Query: 9 GKDGTVGRPG------SPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXX 170
G+ GT+G PG PGKPG G+PG G G PG GK G G PG G G
Sbjct: 606 GQPGTMGLPGPKGSNGDPGKPGEAGNPGVPGQRGAPGKDGKVGPYGPPGPPGLRGERGEQ 665
Query: 171 XXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
PG+ G PG G+PG G +
Sbjct: 666 GPPGPTGFQGHPGPPGPPGEGGKPGDQGVPGGPGAV 701
Score = 57.8 bits (138), Expect = 1e-08
Identities = 33/89 (37%), Positives = 43/89 (48%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G +G G+PG G+PG G+PG +G G+PG RG GA G PG +G G+
Sbjct: 255 GPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGH------KGLE 308
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G+ GP GP+G G GP
Sbjct: 309 GPKGEVGAPGSKGEAGPTGPMGAMGPLGP 337
Score = 57.4 bits (137), Expect = 2e-08
Identities = 33/88 (37%), Positives = 36/88 (40%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G DG G PG G PG G PG G G G+ G G +GD G G+ G
Sbjct: 735 GPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKG---------AE 785
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GPPGP GL G G
Sbjct: 786 GTAGNDGAGGLPGPLGPPGPAGLLGEKG 813
Score = 57.4 bits (137), Expect = 2e-08
Identities = 37/101 (36%), Positives = 40/101 (39%), Gaps = 12/101 (11%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPG---VRGKFGARGDPGDRGQSGNIXXXXXX 179
G+DG VG G G PGP G PG G G PG G G RGDPG RG G++
Sbjct: 1056 GRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGHLGRAGKR 1115
Query: 180 XXXXXXXXXXXXXFPGDNGPPGP---------IGLPGRDGP 275
GD G G GLPG GP
Sbjct: 1116 GLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGP 1156
Score = 57.0 bits (136), Expect = 3e-08
Identities = 32/88 (36%), Positives = 40/88 (45%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG+ G PG G PG G G+ G +G G GDPG +G++G
Sbjct: 429 GPKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGNSGLPGDPGFKGEAG----------- 477
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG +G GPIG PG +G
Sbjct: 478 -------PKGEPGPHGIQGPIGPPGEEG 498
Score = 56.6 bits (135), Expect = 3e-08
Identities = 34/91 (37%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVR---GKFGARGDPGDRGQSGNIXXXXXX 179
G G G G PG+PG G PG G GNPGV+ GK G G PG+ G+ G
Sbjct: 546 GSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIK 605
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
GD G PG G PG G
Sbjct: 606 GQPGTMGLPGPKGSNGDPGKPGEAGNPGVPG 636
Score = 56.2 bits (134), Expect = 4e-08
Identities = 30/89 (33%), Positives = 35/89 (39%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G +G G+ G G PGP+G PG G +G G G G G PG G G+
Sbjct: 396 GPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGPKGPTGSPGTSGPPGSAGPPGSPGPQ 455
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PGD G G G G GP
Sbjct: 456 GSTGPQGNSGLPGDPGFKGEAGPKGEPGP 484
Score = 56.2 bits (134), Expect = 4e-08
Identities = 34/89 (38%), Positives = 39/89 (43%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
GK G G PG PG GPLG G GNPG RG+ G G PG++G +G
Sbjct: 687 GKPGDQGVPGGPGAVGPLGP---RGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSP 743
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG G PG G+ G GP
Sbjct: 744 GPSGTPGDTGPPGLQGMPGERGIAGTPGP 772
Score = 55.8 bits (133), Expect = 6e-08
Identities = 33/88 (37%), Positives = 37/88 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G PG GP+G PG G GN G G+ GA G+ GDRG G
Sbjct: 1023 GDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPG----------- 1071
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G G PGP+G PG G
Sbjct: 1072 ----PAGLPGSQGAPGTPGPVGAPGDAG 1095
Score = 55.1 bits (131), Expect = 1e-07
Identities = 33/90 (36%), Positives = 38/90 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G G PG G GP+G PG G G G G G G G+RG GN
Sbjct: 474 GEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTLGPPGPVGERGAPGN---------- 523
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
FPG +G PGP G G GP+
Sbjct: 524 --------RGFPGSDGLPGPKGAQGERGPV 545
Score = 55.1 bits (131), Expect = 1e-07
Identities = 34/93 (36%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNP---GVRGKFGARGDPGDRGQSGNIXXXXX 176
+G G G G+ G PG G PG G VG P G G G G+PG G G
Sbjct: 887 NGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGPRGDPGS 946
Query: 177 XXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PGD G PG G PG DGP
Sbjct: 947 HGRVGVRGPAGPPGGPGDKGDPGEDGQPGPDGP 979
Score = 54.7 bits (130), Expect = 1e-07
Identities = 30/88 (34%), Positives = 37/88 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG PG GP+G G G G PG G+ G G+PG+ G +G+
Sbjct: 234 GPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARGFPGAP 293
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G GP G +G PG G
Sbjct: 294 GLPGLKGHRGHKGLEGPKGEVGAPGSKG 321
Score = 54.7 bits (130), Expect = 1e-07
Identities = 33/91 (36%), Positives = 37/91 (40%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
K G G +G PGS G PG G G G G G G G RG+ G G G+
Sbjct: 364 KPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIG 423
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG +GPPG G PG GP
Sbjct: 424 TDGTPGPKGPTGSPGTSGPPGSAGPPGSPGP 454
Score = 54.7 bits (130), Expect = 1e-07
Identities = 39/108 (36%), Positives = 42/108 (38%), Gaps = 18/108 (16%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPG------------------KPGPLGHPGWMGTVGNPGVRGKFGARG 128
KDGK G G PG PG PGP G PG G G+ GV G GA G
Sbjct: 643 KDGKVGPYGPPGPPGLRGERGEQGPPGPTGFQGHPGPPGPPGEGGKPGDQGVPGGPGAVG 702
Query: 129 DPGDRGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G RG+ GN PG+ G PG GLPG G
Sbjct: 703 PLGPRGERGN---------------------PGERGEPGITGLPGEKG 729
Score = 54.7 bits (130), Expect = 1e-07
Identities = 51/165 (30%), Positives = 60/165 (36%), Gaps = 11/165 (6%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G G G G PGP PG G G+ G+ G FG RG PG G SG
Sbjct: 1137 GQKGHRGFTGLQGLPGP---PGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPL 1193
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGPIXXXXXXXXXXXXXXXXXXATFVPVRTIRRD 368
G GPPG G PG GP P+ D
Sbjct: 1194 GPPGVRGSVGEAGPEGPPGEPGPPGPPGPPGHLTAALGDIMGHYDESMPD--PLPEFTED 1251
Query: 369 MLA-DDAN--------AAKYLGSDI--IKKPLGTQELPARTCKHL 470
A DD N K L S I ++ P G+++ PARTC L
Sbjct: 1252 QAAPDDKNKTDPGVHATLKSLSSQIETMRSPDGSKKHPARTCDDL 1296
Score = 53.9 bits (128), Expect = 2e-07
Identities = 34/99 (34%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPL------GHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIX 164
++GK G G PG+ G PGP+ G+ G+ G+ G PG +G G RG G G G+
Sbjct: 496 EEGKRGPRGDPGTLGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQG 555
Query: 165 XXXXXXXXXXXXXXXXXXFPGDNGPP---GPIGLPGRDG 272
PG GP GP+G PG DG
Sbjct: 556 DPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDG 594
Score = 53.5 bits (127), Expect = 3e-07
Identities = 33/90 (36%), Positives = 39/90 (43%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
K G G G PG+ G GP G GNPG RG+ G G PG++G +G
Sbjct: 688 KPGDQGVPGGPGAVGPLGPRGER------GNPGERGEPGITGLPGEKGMAGG------HG 735
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PGD GPPG G+PG G
Sbjct: 736 PDGPKGSPGPSGTPGDTGPPGLQGMPGERG 765
Score = 53.1 bits (126), Expect = 4e-07
Identities = 34/88 (38%), Positives = 36/88 (40%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G +G PG GK GP G PG +G G G RG G RG PG G G
Sbjct: 486 GIQGPIGPPGEEGKRGPRGDPGTLGPPGPVGERGAPGNRGFPGSDGLPG---PKGAQGER 542
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
GD G PG GLPG G
Sbjct: 543 GPVGSSGPKGSQGDPGRPGEPGLPGARG 570
Score = 53.1 bits (126), Expect = 4e-07
Identities = 35/95 (36%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G DGT GR G+ G+ G G PG G G+ G G G G PGD GQ G+
Sbjct: 1050 GNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD---------- 1099
Query: 189 XXXXXXXXXXFPGDNGPPGPI------GLPGRDGP 275
PG GP G + GLPG GP
Sbjct: 1100 -----------PGSRGPIGHLGRAGKRGLPGPQGP 1123
Score = 52.8 bits (125), Expect = 5e-07
Identities = 35/96 (36%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGK---PGPL---GHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIX 164
+ G G++G G PG PGP G PG G GNPGV G+ GA G G G G
Sbjct: 595 RPGPPGSIGIKGQPGTMGLPGPKGSNGDPGKPGEAGNPGVPGQRGAPGKDGKVGPYGPPG 654
Query: 165 XXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
F G GPPGP G G+ G
Sbjct: 655 PPGLRGERGEQGPPGPTGFQGHPGPPGPPGEGGKPG 690
Score = 51.2 bits (121), Expect = 1e-06
Identities = 38/111 (34%), Positives = 43/111 (38%), Gaps = 21/111 (18%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMG--------------------TVG-NPGVRGKFGA 122
DG+ G G+PG+PG PG HPG G VG PG G G
Sbjct: 161 DGEPGVPGQPGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGP 220
Query: 123 RGDPGDRGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
RG G +GQ G PGD GP GPIG G +GP
Sbjct: 221 RGPQGLQGQQGGAGPTGPPGE------------PGDPGPMGPIGSRGPEGP 259
Score = 49.3 bits (116), Expect = 5e-06
Identities = 31/88 (35%), Positives = 37/88 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G G PG G PG MG +G+ G G G G+ G+ G++GN
Sbjct: 225 GLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGN---------- 274
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG G PG GLPG G
Sbjct: 275 --PGEVGFAGSPGARGFPGAPGLPGLKG 300
Score = 48.5 bits (114), Expect = 9e-06
Identities = 32/90 (35%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Frame = +3
Query: 9 GKDGTVGRPGS-PGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
G+ G G PG P G G PG G G+ G RG+ G +G PG RG G
Sbjct: 110 GRKGQKGEPGLVPVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQG---------- 159
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG G PGP G P GP
Sbjct: 160 -----IDGEPGVPGQPGAPGPPGHPSHPGP 184
Score = 48.5 bits (114), Expect = 9e-06
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGP---LGHPGW------MGTVGNPGVRGKFGARGDPGDRGQSGNI 161
G G GRPG PG PG G+PG +G +G PG G+ G G G +GQ G +
Sbjct: 552 GSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIKGQPGTM 611
Query: 162 XXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
G+ G PG G PG+DG +
Sbjct: 612 GLPGPKGSNGDPGKPGE---AGNPGVPGQRGAPGKDGKV 647
Score = 47.8 bits (112), Expect = 2e-05
Identities = 37/114 (32%), Positives = 38/114 (33%), Gaps = 24/114 (21%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVG------------------------NPGVRGKF 116
G DG G PG PG PGP GHP G G PG G
Sbjct: 159 GIDGEPGVPGQPGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPV 218
Query: 117 GARGDPGDRGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
G RG G +GQ G G GPPG G PG GPI
Sbjct: 219 GPRGPQGLQGQQGGA---------------------GPTGPPGEPGDPGPMGPI 251
Score = 45.1 bits (105), Expect = 1e-04
Identities = 32/91 (35%), Positives = 34/91 (37%), Gaps = 1/91 (1%)
Frame = +3
Query: 3 KDGKDGTVG-RPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXX 179
K G VG PGS G GP G G G G G G G GDPG G G+
Sbjct: 201 KSGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGS------R 254
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG NG PG +G G G
Sbjct: 255 GPEGPPGKPGEDGEPGRNGNPGEVGFAGSPG 285
Score = 41.2 bits (95), Expect = 0.001
Identities = 34/100 (34%), Positives = 37/100 (37%), Gaps = 12/100 (12%)
Frame = +3
Query: 9 GKDGTVGRPGSPG---KPGPLGHP---GWMGTVGNPGVRGKFGARG------DPGDRGQS 152
G+ G G PGS G + GP G P G G G PGV G+ GA G PG G S
Sbjct: 129 GRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQPGAPGPPGHPSHPGPDGLS 188
Query: 153 GNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GP GP G G G
Sbjct: 189 RPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQGLQG 228
Score = 32.3 bits (72), Expect = 0.67
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARG 128
K+G G +G G PG G +G G G G PG G G G
Sbjct: 1183 KEGNPGPLGPLGPPGVRGSVGEAGPEGPPGEPGPPGPPGPPG 1224
>sp|P25940|CO5A3_HUMAN Collagen alpha 3(V) chain precursor
Length = 1745
Score = 67.8 bits (164), Expect = 1e-11
Identities = 37/90 (41%), Positives = 43/90 (47%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G +G G PG G+PG LG PG MG G G G G +GD G +G+ G+I
Sbjct: 1355 GPEGLRGIPGPVGEPGLLGAPGQMGPPGPLGPSGLPGLKGDTGPKGEKGHIGLIGLIGPP 1414
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
PG GPPGP G PG GPI
Sbjct: 1415 GEAGEKGDQGLPGVQGPPGPKGDPGPPGPI 1444
Score = 63.9 bits (154), Expect = 2e-10
Identities = 37/93 (39%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G G G G PGP G PG G G PG +G G G+PG GQ GN
Sbjct: 596 GEPGPRGLLGPRGSPGPTGRPGVTGIDGAPGAKGNVGPPGEPGPPGQQGN------HGSQ 649
Query: 189 XXXXXXXXXXFPGDNGPPGP---IGLPGRDGPI 278
PG+ GPPG GLPG DGP+
Sbjct: 650 GLPGPQGLIGTPGEKGPPGNPGIPGLPGSDGPL 682
Score = 62.0 bits (149), Expect = 8e-10
Identities = 35/88 (39%), Positives = 40/88 (45%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+DG G PG G PG G PG+ G G PG +GK G G PG RG+ G
Sbjct: 857 GQDGAPGIPGEKGLPGLQGPPGFPGPKGPPGHQGKDGRPGHPGQRGELG----------- 905
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
F G GPPGP G+ G G
Sbjct: 906 ----------FQGQTGPPGPAGVLGPQG 923
Score = 61.2 bits (147), Expect = 1e-09
Identities = 37/98 (37%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGP---LGHPGWMGTVGNPGVRGKF------GARGDPGDRGQSGNI 161
GK G G PG PG+PGP +G PG +G +G G GK G RG PG RG+ G
Sbjct: 785 GKLGVPGLPGYPGRPGPKGSIGFPGPLGPIGEKGKSGKTGQPGLEGERGPPGSRGERGQP 844
Query: 162 XXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG+ G PG G PG GP
Sbjct: 845 GATGQPGPKGDVGQDGAPGIPGEKGLPGLQGPPGFPGP 882
Score = 60.5 bits (145), Expect = 2e-09
Identities = 48/174 (27%), Positives = 70/174 (40%), Gaps = 6/174 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGH---PGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXX 179
G+ G G PG G PGP G PG +G++G+PG G G G G +G G++
Sbjct: 1418 GEKGDQGLPGVQGPPGPKGDPGPPGPIGSLGHPGPPGVAGPLGQKGSKGSPGSMGPR--- 1474
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPIXXXXXXXXXXXXXXXXXXATFVPVRTI 359
GD GP GP G PG + VP+ +
Sbjct: 1475 ---------------GDTGPAGPPGPPGAPAELHGLRRRRRFVP----------VPLPVV 1509
Query: 360 R---RDMLADDANAAKYLGSDIIKKPLGTQELPARTCKHLFDSDPNFIDGYYYI 512
++LA + + L + +++P GT E P C L + P+ DG Y+I
Sbjct: 1510 EGGLEEVLASLTSLS--LELEQLRRPPGTAERPGLVCHELHRNHPHLPDGEYWI 1561
Score = 59.7 bits (143), Expect = 4e-09
Identities = 35/93 (37%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
GK G VG G G PGP G PG G G G G G G PG G+ G
Sbjct: 923 GKTGEVGPLGERGPPGPPGPPGEQGLPGLEGREGAKGELGPPGPLGKEGPAGLRGFPGPK 982
Query: 189 XXXXXXXXXXFPGDNGPPGPIGL---PGRDGPI 278
GD GPPGP+G PG GP+
Sbjct: 983 GGPGDPGPTGLKGDKGPPGPVGANGSPGERGPL 1015
Score = 59.7 bits (143), Expect = 4e-09
Identities = 37/96 (38%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Frame = +3
Query: 9 GKDGTVGRPGSPG------KPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXX 170
G G +G PG PG PG G PG +G G PG G+ GA G PG RG SG++
Sbjct: 1262 GLPGDLGPPGDPGVSGIDGSPGEKGDPGDVGGPGPPGASGEPGAPGPPGKRGPSGHMGRE 1321
Query: 171 XXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
G G PGP G PGR GP+
Sbjct: 1322 GREGEK------------GAKGEPGPDGPPGRTGPM 1345
Score = 58.9 bits (141), Expect = 7e-09
Identities = 35/92 (38%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGD---PGDRGQSGNIXXXXXX 179
G G G PG PG GPLGHPG G G G +G G+ G PG RG G
Sbjct: 665 GPPGNPGIPGLPGSDGPLGHPGHEGPTGEKGAQGPPGSAGPPGYPGPRGVKGTSGNRGLQ 724
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
F GD G G G PG GP
Sbjct: 725 GEKGEKGEDGFPGFKGDVGLKGDQGKPGAPGP 756
Score = 58.5 bits (140), Expect = 9e-09
Identities = 38/106 (35%), Positives = 45/106 (42%), Gaps = 15/106 (14%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVR---------------GKFGARGDPG 137
+DG G+VG G PG GP G PG G G+PG + G+ GA G PG
Sbjct: 1251 EDGAKGSVGPTGLPGDLGPPGDPGVSGIDGSPGEKGDPGDVGGPGPPGASGEPGAPGPPG 1310
Query: 138 DRGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
RG SG++ PG GP G G PGR GP
Sbjct: 1311 KRGPSGHMGREGREGEKGAKGEPGPDGPPGRTGPMGARGPPGRVGP 1356
Score = 58.2 bits (139), Expect = 1e-08
Identities = 34/93 (36%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDR---GQSGNIXXXXXX 179
GK+G G G PG G G PG G G+ G G GA G PG+R G +G I
Sbjct: 968 GKEGPAGLRGFPGPKGGPGDPGPTGLKGDKGPPGPVGANGSPGERGPLGPAGGIGLPGQS 1027
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
G+ GPPGP G G GP+
Sbjct: 1028 GSEGPVGPAGKKGSRGERGPPGPTGKDGIPGPL 1060
Score = 58.2 bits (139), Expect = 1e-08
Identities = 34/97 (35%), Positives = 41/97 (42%), Gaps = 9/97 (9%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGH---------PGWMGTVGNPGVRGKFGARGDPGDRGQSGNI 161
G +GT G PG G+PG +G PG G G PG +G G +GD G G +G
Sbjct: 1184 GSEGTPGLPGGVGQPGAVGEKGERGDAGDPGPPGAPGIPGPKGDIGEKGDSGPSGAAGPP 1243
Query: 162 XXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PGD GPPG G+ G DG
Sbjct: 1244 GKKGPPGEDGAKGSVGPTGLPGDLGPPGDPGVSGIDG 1280
Score = 57.4 bits (137), Expect = 2e-08
Identities = 33/90 (36%), Positives = 38/90 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G G G PG G +G G G G PG RG+ G G G GQ+G
Sbjct: 725 GEKGEKGEDGFPGFKGDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAGEEGPPGSAGEK 784
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
+PG GP G IG PG GPI
Sbjct: 785 GKLGVPGLPGYPGRPGPKGSIGFPGPLGPI 814
Score = 57.4 bits (137), Expect = 2e-08
Identities = 35/93 (37%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
++G++G G G PG GP G G MG G PG G G RG PG G+ G +
Sbjct: 1320 REGREGEKGAKGEPGPDGPPGRTGPMGARGPPGRVGPEGLRGIPGPVGEPGLLGA----- 1374
Query: 183 XXXXXXXXXXXXFPGDNGPPGPI---GLPGRDG 272
PG GPPGP+ GLPG G
Sbjct: 1375 -------------PGQMGPPGPLGPSGLPGLKG 1394
Score = 57.0 bits (136), Expect = 3e-08
Identities = 33/90 (36%), Positives = 40/90 (44%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
DG G G G PG+PGP PG G G+ G+ G G G PG++G GN
Sbjct: 622 DGAPGAKGNVGPPGEPGP---PGQQGNHGSQGLPGPQGLIGTPGEKGPPGN--------- 669
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG G GP+G PG +GP
Sbjct: 670 ---------PGIPGLPGSDGPLGHPGHEGP 690
Score = 56.6 bits (135), Expect = 3e-08
Identities = 32/87 (36%), Positives = 36/87 (41%)
Frame = +3
Query: 18 GTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXXXXX 197
G +G PG G PGP G G +G VG+ G G G RG G G G
Sbjct: 1142 GVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPQGPTGSEGTPGLPGGVGQPGAV 1201
Query: 198 XXXXXXXFPGDNGPPGPIGLPGRDGPI 278
GD GPPG G+PG G I
Sbjct: 1202 GEKGERGDAGDPGPPGAPGIPGPKGDI 1228
Score = 56.2 bits (134), Expect = 4e-08
Identities = 33/89 (37%), Positives = 37/89 (41%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
GK G+ G G PG G G PG +G +G PG G G GD GD G G+
Sbjct: 1037 GKKGSRGERGPPGPTGKDGIPGPLGPLGPPGAAGPSGEEGDKGDVGAPGHKGSKGDKGDA 1096
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G GPPG G GR GP
Sbjct: 1097 GPPGQPGIRGPAGHPGPPGADGAQGRRGP 1125
Score = 55.8 bits (133), Expect = 6e-08
Identities = 34/89 (38%), Positives = 35/89 (39%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG PG GP GHPG G G G RG G G GD G G +
Sbjct: 1091 GDKGDAGPPGQPGIRGPAGHPGPPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQ 1150
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
GD G GP G PG GP
Sbjct: 1151 GLPGPPGEKGEVGDVGSMGPHGAPGPRGP 1179
Score = 55.8 bits (133), Expect = 6e-08
Identities = 35/92 (38%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGA---RGDPGDRGQSGNIXXXXXX 179
GK G G G+ G GP G PG +G G+PGV G G+ +GDPGD G G
Sbjct: 1244 GKKGPPGEDGAKGSVGPTGLPGDLGPPGDPGVSGIDGSPGEKGDPGDVGGPGP------- 1296
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG +G PG G PG+ GP
Sbjct: 1297 --------------PGASGEPGAPGPPGKRGP 1314
Score = 55.5 bits (132), Expect = 7e-08
Identities = 34/96 (35%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGD------RGQSGNIXXX 170
G G VG G PG PG G PG G G PG+ G G RG PG + G+
Sbjct: 398 GPQGVVGPSGPPGPPGFPGDPGPPGPAGLPGIPGIDGIRGPPGTVIMMPFQFAGGSFKGP 457
Query: 171 XXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
GPPGP+GL GR GP+
Sbjct: 458 PVSFQQAQAQAVLQQTQLSMKGPPGPVGLTGRPGPV 493
Score = 55.1 bits (131), Expect = 1e-07
Identities = 35/93 (37%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGH---PGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXX 179
G G VG+PG PG+ G G PG G G PG RG G RG PG G+ G
Sbjct: 566 GDFGHVGQPGPPGEDGERGAEGPPGPTGQAGEPGPRGLLGPRGSPGPTGRPGVTGIDGAP 625
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
PG G G GLPG G I
Sbjct: 626 GAKGNVGPPGEPGPPGQQGNHGSQGLPGPQGLI 658
Score = 55.1 bits (131), Expect = 1e-07
Identities = 33/89 (37%), Positives = 43/89 (48%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G++G G+PG GP G G GT G PG G+ GA G+ G+RG +G+
Sbjct: 1163 GDVGSMGPHGAPGPRGPQGPTGSEGTPGLPGGVGQPGAVGEKGERGDAGD---PGPPGAP 1219
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
GD+GP G G PG+ GP
Sbjct: 1220 GIPGPKGDIGEKGDSGPSGAAGPPGKKGP 1248
Score = 54.7 bits (130), Expect = 1e-07
Identities = 32/88 (36%), Positives = 37/88 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G PGK GP G G G+VG G+ G G GDPG G G+
Sbjct: 1232 GDSGPSGAAGPPGKKGPPGEDGAKGSVGPTGLPGDLGPPGDPGVSGIDGS---------- 1281
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG+ G PG +G PG G
Sbjct: 1282 -----------PGEKGDPGDVGGPGPPG 1298
Score = 54.3 bits (129), Expect = 2e-07
Identities = 33/91 (36%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKF---GARGDPGDRGQSGNIXXXXXX 179
G+ G G PGS G+ G LG PG G G PG +G G G G++G+SG
Sbjct: 770 GQAGEEGPPGSAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPIGEKGKSGKTGQPGLE 829
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG G PGP G G+DG
Sbjct: 830 GERGPPGSRGERGQPGATGQPGPKGDVGQDG 860
Score = 53.9 bits (128), Expect = 2e-07
Identities = 33/89 (37%), Positives = 36/89 (40%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG PG+ G +G G MG G PG RG G G G G G +
Sbjct: 1145 GPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPQGPTGSEGTPGLPGGVGQPGAVGEK 1204
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
GD G PGP G PG GP
Sbjct: 1205 GER---------GDAGDPGPPGAPGIPGP 1224
Score = 53.5 bits (127), Expect = 3e-07
Identities = 33/88 (37%), Positives = 37/88 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G GRPG PG+ G LG G G G GV G G G+ G G+ G
Sbjct: 887 GHQGKDGRPGHPGQRGELGFQGQTGPPGPAGVLGPQGKTGEVGPLGERGP---------- 936
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GPPG GLPG +G
Sbjct: 937 -----------PGPPGPPGEQGLPGLEG 953
Score = 53.5 bits (127), Expect = 3e-07
Identities = 33/89 (37%), Positives = 37/89 (41%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G VG GSPG+ GPLG G +G G G G G G G RG+ G
Sbjct: 998 GPPGPVGANGSPGERGPLGPAGGIGLPGQSGSEGPVGPAGKKGSRGERG----------- 1046
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G GP GP+G PG GP
Sbjct: 1047 ----PPGPTGKDGIPGPLGPLGPPGAAGP 1071
Score = 53.1 bits (126), Expect = 4e-07
Identities = 31/90 (34%), Positives = 33/90 (36%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
+ G DG G PG G G G G G G G RG FG G PG G+ G
Sbjct: 531 RPGADGARGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGERGAEGPPG 590
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G G PGP G PG G
Sbjct: 591 PTGQAGEPGPRGLLGPRGSPGPTGRPGVTG 620
Score = 52.8 bits (125), Expect = 5e-07
Identities = 32/89 (35%), Positives = 38/89 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G++G G G G GP G PG +G +G PG GARG PGD G G+
Sbjct: 503 GEEGAEGPQGPRGLQGPHGPPGRVGKMGRPGAD---GARGLPGDTGPKGDRGFDGLPGLP 559
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G GPPG G G +GP
Sbjct: 560 GEKGQRGDFGHVGQPGPPGEDGERGAEGP 588
Score = 52.0 bits (123), Expect = 8e-07
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHP---GWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXX 176
+G G G G PG GP G+P G GT GN G++G+ G +G+ G G G++
Sbjct: 688 EGPTGEKGAQGPPGSAGPPGYPGPRGVKGTSGNRGLQGEKGEKGEDGFPGFKGDV----- 742
Query: 177 XXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
GD G PG G G DGP
Sbjct: 743 -------------GLKGDQGKPGAPGPRGEDGP 762
Score = 50.8 bits (120), Expect = 2e-06
Identities = 28/79 (35%), Positives = 33/79 (41%)
Frame = +3
Query: 36 GSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXXXXXXXXXXX 215
G PG G G PG +G G+PG++G+ GA G G RG G
Sbjct: 479 GPPGPVGLTGRPGPVGLPGHPGLKGEEGAEGPQGPRGLQGPHGPPGRVGKMGRPGADGAR 538
Query: 216 XFPGDNGPPGPIGLPGRDG 272
PGD GP G G G G
Sbjct: 539 GLPGDTGPKGDRGFDGLPG 557
Score = 49.7 bits (117), Expect = 4e-06
Identities = 37/99 (37%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPG------PLGHPGWMGTVGNPGVRGKFGA---RGDPGDRGQSG 155
++G G VG PG G G P G PG G G+PG G GA RG PG GQ G
Sbjct: 1074 EEGDKGDVGAPGHKGSKGDKGDAGPPGQPGIRGPAGHPGPPGADGAQGRRGPPGLFGQKG 1133
Query: 156 NIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
+ F G GPPG GLPG G
Sbjct: 1134 D---------------DGVRGFVGVIGPPGLQGLPGPPG 1157
Score = 47.4 bits (111), Expect = 2e-05
Identities = 32/94 (34%), Positives = 36/94 (38%), Gaps = 6/94 (6%)
Frame = +3
Query: 9 GKDGTVGRPGS------PGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXX 170
GKDG G PG G+ GP G G +G G G G G RG PG G G
Sbjct: 890 GKDGRPGHPGQRGELGFQGQTGPPGPAGVLGPQGKTGEVGPLGERGPPGPPGPPGE---- 945
Query: 171 XXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G+ GPPGP+G G G
Sbjct: 946 -----QGLPGLEGREGAKGELGPPGPLGKEGPAG 974
Score = 42.4 bits (98), Expect = 7e-04
Identities = 28/83 (33%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +3
Query: 27 GRPGSPGKPGPLGH-PGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXXXXXXX 203
G G+ G+P + + G G PG +G G G PG G
Sbjct: 373 GEKGAKGEPAVIEKGQQFEGPPGAPGPQGVVGPSGPPGPPG------------------- 413
Query: 204 XXXXXFPGDNGPPGPIGLPGRDG 272
FPGD GPPGP GLPG G
Sbjct: 414 -----FPGDPGPPGPAGLPGIPG 431
>sp|P13941|CO3A1_RAT Collagen alpha 1(III) chain precursor
Length = 636
Score = 67.0 bits (162), Expect = 2e-11
Identities = 47/171 (27%), Positives = 66/171 (38%), Gaps = 3/171 (1%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG PG PG GH G +G+ G G RG G G PG G SG+
Sbjct: 279 GHRGFPGNPGPPGSPGAAGHQGAVGSPGPAGPRGPVGPHGPPGKDGSSGHPGPIGPPGPR 338
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGPIXXXXXXXXXXXXXXXXXXATFVPVRTIRRD 368
PG G PGP G PG GP + + +
Sbjct: 339 GNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGGAAIAGVGGEKSGGFSPYYGDDPMDFK 398
Query: 369 MLADD-ANAAKYLGSDI--IKKPLGTQELPARTCKHLFDSDPNFIDGYYYI 512
+ ++ ++ K + I + P G+++ PAR C+ L P G Y++
Sbjct: 399 INTEEIMSSLKSVNGQIESLISPDGSRKNPARNCRDLKFCHPELKSGEYWV 449
Score = 60.8 bits (146), Expect = 2e-09
Identities = 34/90 (37%), Positives = 39/90 (43%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
+ GK G G G G PGP G PG GT G PG G G+ G PG G G
Sbjct: 151 ESGKPGASGHNGERGPPGPQGLPGQPGTAGEPGRDGNPGSDGQPGRDGSPGG------KG 204
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GPPGP+G G++G
Sbjct: 205 DRGENGSPGAPGAPGHPGPPGPVGPSGKNG 234
Score = 59.7 bits (143), Expect = 4e-09
Identities = 37/92 (40%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G G G PG GP G PG G G G G GA G PG RG G
Sbjct: 6 GEGGPPGAAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGGRGLPGP---------- 55
Query: 189 XXXXXXXXXXFPGDN---GPPGPIGLPGRDGP 275
PG+N GPPGP G PG+DGP
Sbjct: 56 -----------PGNNGNPGPPGPSGAPGKDGP 76
Score = 59.3 bits (142), Expect = 5e-09
Identities = 35/90 (38%), Positives = 41/90 (45%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G+ G PG+ G PG G PG G GNPG G GA G G G +GN
Sbjct: 33 GERGSPGGPGAAGFPGGRGLPGPPGNNGNPGPPGPSGAPGKDGPPGPAGNSGSPGNPGVA 92
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
PG+ GPPG G PG GP+
Sbjct: 93 GPKGDAGQ---PGEKGPPGAQGPPGSPGPL 119
Score = 58.9 bits (141), Expect = 7e-09
Identities = 33/89 (37%), Positives = 38/89 (42%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
+G G G G+PGK GP G G G+ GNPGV G G G PG++G G
Sbjct: 59 NGNPGPPGPSGAPGKDGPPGPAGNSGSPGNPGVAGPKGDAGQPGEKGPPGAQGPPGSPGP 118
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G G PGP G PG G
Sbjct: 119 LGIAGLTGARGLAGPPGMPGPRGSPGPQG 147
Score = 58.2 bits (139), Expect = 1e-08
Identities = 34/88 (38%), Positives = 38/88 (43%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G G G PG PGPLG G G G G G G RG PG +G G
Sbjct: 102 GEKGPPGAQGPPGSPGPLGIAGLTGARGLAGPPGMPGPRGSPGPQGIKGE---------- 151
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G+ GPPGP GLPG+ G
Sbjct: 152 --SGKPGASGHNGERGPPGPQGLPGQPG 177
Score = 56.2 bits (134), Expect = 4e-08
Identities = 34/98 (34%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPL------GHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIX 164
++G G G PG PG PGP+ G G G G G G GARG PG +G G+
Sbjct: 208 ENGSPGAPGAPGHPGPPGPVGPSGKNGDRGETGPAGPSGAPGPAGARGAPGPQGPRGD-- 265
Query: 165 XXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
FPG+ GPPG G G G +
Sbjct: 266 -KGETGERGSNGIKGHRGFPGNPGPPGSPGAAGHQGAV 302
Score = 53.5 bits (127), Expect = 3e-07
Identities = 32/90 (35%), Positives = 37/90 (41%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
DG+ G G PG G G G PG G G+PG G G G GDRG++G
Sbjct: 191 DGQPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKNGDRGETGP--------- 241
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G +G PGP G G GP
Sbjct: 242 ------------AGPSGAPGPAGARGAPGP 259
Score = 49.7 bits (117), Expect = 4e-06
Identities = 32/88 (36%), Positives = 35/88 (39%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G GS G G G PG G G+PG G GA G PG G G +
Sbjct: 264 GDKGETGERGSNGIKGHRGFPGNPGPPGSPGAAGHQGAVGSPGPAGPRGPVGPHGPPGK- 322
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G +G PGPIG PG G
Sbjct: 323 -----------DGSSGHPGPIGPPGPRG 339
>sp|P11087|CO1A1_MOUSE Collagen alpha 1(I) chain precursor
Length = 1453
Score = 66.6 bits (161), Expect = 3e-11
Identities = 40/96 (41%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
GKDG G G G PGP G PG G G G G GARG PGDRG++G
Sbjct: 747 GKDGARGLTGPIGPPGPAGAPGDKGEAGPSGPPGPTGARGAPGDRGEAGPPGPAGFAGPP 806
Query: 189 XXXXXXXXXXFPGDN------GPPGPIGLPGRDGPI 278
PGD GPPGP G G GPI
Sbjct: 807 GADGQPGAKGEPGDTGVKGDAGPPGPAGPAGPPGPI 842
Score = 63.9 bits (154), Expect = 2e-10
Identities = 34/91 (37%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
GKDG G G+PG GP G G G G+PG +G G G PG+ G+ G
Sbjct: 600 GKDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAP 659
Query: 189 XXXXXXXXXXFPGD---NGPPGPIGLPGRDG 272
FPG+ GPPGP G G +G
Sbjct: 660 GPSGARGERGFPGERGVQGPPGPAGPRGNNG 690
Score = 62.4 bits (150), Expect = 6e-10
Identities = 36/89 (40%), Positives = 40/89 (44%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G GSPG PGP G G G VG PG RG+ G G PG G+ G
Sbjct: 924 GSPGADGPAGSPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGK---------- 973
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G+ GPPGP+G PG GP
Sbjct: 974 -----QGPSGSSGERGPPGPMGPPGLAGP 997
Score = 61.6 bits (148), Expect = 1e-09
Identities = 58/199 (29%), Positives = 74/199 (37%), Gaps = 31/199 (15%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPG------------PLGHPGWMGTVGNPGVRGKFGARGDPGDRGQS 152
G G G PGSPG PG P G PG G+ G G+ G G G PG RG++
Sbjct: 1101 GFSGLQGPPGSPGSPGEQGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPGPRGRT 1160
Query: 153 GNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPIXXXXXXXXXXXXXXXXXX 332
G+ G GPPGP G PG GP
Sbjct: 1161 GD---------------------SGPAGPPGPPGPPGPPGP-------------PSGGYD 1186
Query: 333 ATFVPVRTIRRDM------LADDANAA-----------KYLGSDI--IKKPLGTQELPAR 455
+F+P + ADDAN K L I I+ P G+++ PAR
Sbjct: 1187 FSFLPQPPQEKSQDGDRYYRADDANVVRDRDLAVDATLKSLSQQIENIRSPEGSRKNPAR 1246
Query: 456 TCKHLFDSDPNFIDGYYYI 512
TC+ L ++ G Y+I
Sbjct: 1247 TCRDLKMCHSDWKSGEYWI 1265
Score = 59.7 bits (143), Expect = 4e-09
Identities = 34/88 (38%), Positives = 38/88 (43%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG PG PGP G G G G PG G G RG PG G++G+
Sbjct: 171 GPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGGSGPMGPRGPPGPPGKNGD---------- 220
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG+ GPPGP G G G
Sbjct: 221 --DGEAGKPGRPGERGPPGPQGARGLPG 246
Score = 59.3 bits (142), Expect = 5e-09
Identities = 35/88 (39%), Positives = 37/88 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G DG VG G PG GP G PG+ G VG G G GARG G +G G
Sbjct: 312 GNDGAVGAAGPPGPTGPTGPPGFPGAVGAKGEAGPQGARGSEGPQGVRGEPGP------- 364
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG G GP G PG DG
Sbjct: 365 -----------PGPAGAAGPAGNPGADG 381
Score = 58.9 bits (141), Expect = 7e-09
Identities = 37/96 (38%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGK---PGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXX 173
K+G DG G+PG PG+ PGP G G GT G PG++G G G G +G +G
Sbjct: 217 KNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAG------ 270
Query: 174 XXXXXXXXXXXXXXXFPGDNGPP---GPIGLPGRDG 272
PG+NG P GP GLPG G
Sbjct: 271 ------PAGPKGEPGSPGENGAPGQMGPRGLPGERG 300
Score = 58.2 bits (139), Expect = 1e-08
Identities = 33/91 (36%), Positives = 40/91 (43%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
+DG+ G G PG+ G+ G +G PG GT G PG G+ G G PG G +G
Sbjct: 550 QDGRPGPAGPPGARGQAGVMGFPGPKGTAGEPGKAGERGLPGPPGAVGPAGKDGEAGAQG 609
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G G PG GLPG GP
Sbjct: 610 APGPAGPAGERGEQGPAGSPGFQGLPGPAGP 640
Score = 58.2 bits (139), Expect = 1e-08
Identities = 33/90 (36%), Positives = 36/90 (40%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
DG+ G G PG G G G PG G G PG G GA G G RG +G
Sbjct: 809 DGQPGAKGEPGDTGVKGDAGPPGPAGPAGPPGPIGNVGAPGPKGPRGAAGPPGATGFPGA 868
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G GPPGP+G G GP
Sbjct: 869 AGRVGPPGPSGNAGPPGPPGPVGKEGGKGP 898
Score = 57.4 bits (137), Expect = 2e-08
Identities = 34/88 (38%), Positives = 36/88 (40%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G PG PG G PG MG G PG RG+ G G G RG G +
Sbjct: 267 GDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGPPGTAGARGNDGAVGAAGP---- 322
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GP GP G PG G
Sbjct: 323 -----------PGPTGPTGPPGFPGAVG 339
Score = 57.0 bits (136), Expect = 3e-08
Identities = 33/88 (37%), Positives = 35/88 (39%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G DG G G+PG PG G PG G G G G G +GD GD G G
Sbjct: 693 GNDGAKGDTGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKG---------AD 743
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G GPPGP G PG G
Sbjct: 744 GSPGKDGARGLTGPIGPPGPAGAPGDKG 771
Score = 57.0 bits (136), Expect = 3e-08
Identities = 33/96 (34%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G+PG G G PG G G PG G+ GA+G+PGD G G+
Sbjct: 777 GPPGPTGARGAPGDRGEAGPPGPAGFAGPPGADGQPGAKGEPGDTGVKGDAGPPGPAGPA 836
Query: 189 XXXXXXXXXXFPGDNGP------PGPIGLPGRDGPI 278
PG GP PG G PG G +
Sbjct: 837 GPPGPIGNVGAPGPKGPRGAAGPPGATGFPGAAGRV 872
Score = 56.6 bits (135), Expect = 3e-08
Identities = 34/88 (38%), Positives = 37/88 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G +G G PG G GP+G PG G G PG+ G G G PG G GN
Sbjct: 99 GVEGPKGGPGPQGPRGPVGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNF---ASQMSY 155
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GP GP GLPG G
Sbjct: 156 GYDEKSAGVSVPGPMGPSGPRGLPGPPG 183
Score = 56.2 bits (134), Expect = 4e-08
Identities = 33/90 (36%), Positives = 39/90 (43%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
++GK G G PG G PGP G G G+ G PG G G +G G+RG G
Sbjct: 454 EEGKRGARGEPGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPSGERGAPG--------- 504
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG+ G PG GLPG G
Sbjct: 505 ------PAGPKGSPGEAGRPGEAGLPGAKG 528
Score = 55.8 bits (133), Expect = 6e-08
Identities = 32/89 (35%), Positives = 36/89 (40%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
DG G G PG+PG G G G G G G+ G G RGD G +G G+
Sbjct: 695 DGAKGDTGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGARGL 754
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PGD G GP G PG G
Sbjct: 755 TGPIGPPGPAGAPGDKGEAGPSGPPGPTG 783
Score = 55.5 bits (132), Expect = 7e-08
Identities = 33/90 (36%), Positives = 35/90 (38%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
GK G G G G PGP+G PG G G G G GA G PG G G
Sbjct: 972 GKQGPSGSSGERGPPGPMGPPGLAGPPGESGREGSPGAEGSPGRDGAPG----------- 1020
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
G GPPG G PG GP+
Sbjct: 1021 ----AKGDRGETGPAGPPGAPGAPGAPGPV 1046
Score = 53.9 bits (128), Expect = 2e-07
Identities = 31/88 (35%), Positives = 37/88 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G +G G G+PG PG G G G G PG +G G G PG++G +G
Sbjct: 387 GANGAPGIAGAPGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGATGVQ 446
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G G PGP GLPG G
Sbjct: 447 GPPGPAGEEGKRGARGEPGPSGLPGPPG 474
Score = 53.5 bits (127), Expect = 3e-07
Identities = 33/89 (37%), Positives = 36/89 (40%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G VG PG G GP G PG +G G G RG+ G G PG+ G
Sbjct: 867 GAAGRVGPPGPSGNAGPPGPPGPVGKEGGKGPRGETGPAGRPGEVGP------------- 913
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG GP G G PG DGP
Sbjct: 914 -----------PGPPGPAGEKGSPGADGP 931
Score = 53.1 bits (126), Expect = 4e-07
Identities = 31/88 (35%), Positives = 33/88 (37%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G PG G G PG G G PG RG G +G G G GN
Sbjct: 372 GPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNK 431
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G GPPGP G G+ G
Sbjct: 432 GDTGAKGEPGATGVQGPPGPAGEEGKRG 459
Score = 53.1 bits (126), Expect = 4e-07
Identities = 32/89 (35%), Positives = 37/89 (41%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
DGK G G G G+PGP G PG G G G G G G+PG G+ G
Sbjct: 539 DGKTGPPGPAGQDGRPGPAGPPGARGQAGVMGFPGPKGTAGEPGKAGERG---------- 588
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
P GPPG +G G+DG
Sbjct: 589 -----------LP---GPPGAVGPAGKDG 603
Score = 52.4 bits (124), Expect = 6e-07
Identities = 33/89 (37%), Positives = 38/89 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G+ G G G+PGP G G G GNPG G+ GA+G G G +G
Sbjct: 348 GARGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAG----------- 396
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
FPG GP GP G G GP
Sbjct: 397 -------APGFPGARGPSGPQGPSGPPGP 418
Score = 52.4 bits (124), Expect = 6e-07
Identities = 31/89 (34%), Positives = 33/89 (37%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G+PG GP G PG G G G+ G G G PG G G
Sbjct: 492 GPKGPSGERGAPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGK---------- 541
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
GPPGP G GR GP
Sbjct: 542 --------------TGPPGPAGQDGRPGP 556
Score = 52.0 bits (123), Expect = 8e-07
Identities = 37/108 (34%), Positives = 40/108 (37%), Gaps = 18/108 (16%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGN------------------PGVRGKFGARGDP 134
G+DG G+PG PG PGP G PG G GN PG G G RG P
Sbjct: 120 GRDGIPGQPGLPGPPGPPGPPGPPGLGGNFASQMSYGYDEKSAGVSVPGPMGPSGPRGLP 179
Query: 135 GDRGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
G G G G GPPG G PG GP+
Sbjct: 180 GPPGAPGP---------------------QGFQGPPGEPGEPGGSGPM 206
Score = 51.2 bits (121), Expect = 1e-06
Identities = 31/89 (34%), Positives = 34/89 (38%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG+ G+PG G PG G G+ G G G G PG G G
Sbjct: 798 GPAGFAGPPGADGQPGAKGEPGDTGVKGDAGPPGPAGPAGPPGPIGNVGAPGPKGPRGAA 857
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G GPPGP G G GP
Sbjct: 858 GPPGATGFPGAAGRVGPPGPSGNAGPPGP 886
Score = 50.8 bits (120), Expect = 2e-06
Identities = 32/88 (36%), Positives = 36/88 (40%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G G G G PGP G G G GN G +G GA G PG +G G
Sbjct: 666 GERGFPGERGVQGPPGPAGPRGNNGAPGNDGAKGDTGAPGAPGSQGAPG---LQGMPGER 722
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
GD GP G G PG+DG
Sbjct: 723 GAAGLPGPKGDRGDAGPKGADGSPGKDG 750
Score = 50.4 bits (119), Expect = 2e-06
Identities = 32/92 (34%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGD---RGQSGNIXXXXXX 179
G G G+PG G PG LG PG G G G G+ G +G PG RG +G
Sbjct: 639 GPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGNNGAPGNDGAK 698
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG G PG G G GP
Sbjct: 699 GDTGAPGAPGSQGAPGLQGMPGERGAAGLPGP 730
Score = 49.7 bits (117), Expect = 4e-06
Identities = 33/107 (30%), Positives = 37/107 (34%), Gaps = 18/107 (16%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNI--------- 161
G+DG G G G+ GP G PG G G PG G G GD G+ G +G
Sbjct: 1014 GRDGAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAGPIGPAGAR 1073
Query: 162 ---------XXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
F G GPPG G PG GP
Sbjct: 1074 GPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGSPGSPGEQGP 1120
Score = 49.3 bits (116), Expect = 5e-06
Identities = 33/92 (35%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGV---RGKFGARGDPGDRGQSGNIXXXXXX 179
G G G PG+ G G G PG G G PG GK GARG+PG G G
Sbjct: 420 GNSGEPGAPGNKGDTGAKGEPGATGVQGPPGPAGEEGKRGARGEPGPSGLPG-------- 471
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG G PG G+ G GP
Sbjct: 472 -------PPGERGGPGSRGFPGADGVAGPKGP 496
Score = 48.9 bits (115), Expect = 7e-06
Identities = 31/91 (34%), Positives = 36/91 (39%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
++G G G PG G PG G G G G PG G GA G G G++G+
Sbjct: 1003 REGSPGAEGSPGRDGAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGD-------- 1054
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G GP GPIG G GP
Sbjct: 1055 ----------RGETGPAGPAGPIGPAGARGP 1075
Score = 48.5 bits (114), Expect = 9e-06
Identities = 36/105 (34%), Positives = 38/105 (36%), Gaps = 15/105 (14%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGT---------------VGNPGVRGKFGARGDPG 137
+DG G G PG PG PGP G PG G V PG G G RG PG
Sbjct: 121 RDGIPGQPGLPGPPGPPGPPGPPGLGGNFASQMSYGYDEKSAGVSVPGPMGPSGPRGLPG 180
Query: 138 DRGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G G PG +GP GP G PG G
Sbjct: 181 PPGAPG---------PQGFQGPPGEPGEPGGSGPMGPRGPPGPPG 216
Score = 48.5 bits (114), Expect = 9e-06
Identities = 33/92 (35%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVR---GKFGARGDPGDRGQSGNIXXXXXX 179
G G +G G PG PG G G G G PG R G GARG PG G G
Sbjct: 201 GGSGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFS 260
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G+ G PG G PG+ GP
Sbjct: 261 GLDGAKGDAGPAGPKGEPGSPGENGAPGQMGP 292
Score = 48.1 bits (113), Expect = 1e-05
Identities = 30/88 (34%), Positives = 32/88 (36%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G PG G G PG G G G RG+ G G PG G+ G
Sbjct: 429 GNKGDTGAKGEPGATGVQGPPGPAGEEGKRGARGEPGPSGLPGPPGERGGPGSRGFPGAD 488
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G GP GP G PG G
Sbjct: 489 GVAGPKGPSGERGAPGPAGPKGSPGEAG 516
Score = 30.8 bits (68), Expect = 2.0
Identities = 22/68 (32%), Positives = 23/68 (33%)
Frame = +3
Query: 72 GWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPI 251
G G G PG +G G G PG G PG G PGP
Sbjct: 99 GVEGPKGGPGPQGPRGPVGPPGRDG------------------------IPGQPGLPGPP 134
Query: 252 GLPGRDGP 275
G PG GP
Sbjct: 135 GPPGPPGP 142
>sp|Q02388|CO7A1_HUMAN Collagen alpha 1(VII) chain precursor (Long-chain collagen) (LC
collagen)
Length = 2944
Score = 66.6 bits (161), Expect = 3e-11
Identities = 37/91 (40%), Positives = 41/91 (45%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
+DG G G G PG GP G PG G G PG+ GK G GDPG+ G+ G
Sbjct: 1807 RDGLPGLRGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGASG 1866
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG GP GP GLPG GP
Sbjct: 1867 REGRDGPKGERGAPGILGPQGPPGLPGPVGP 1897
Score = 63.9 bits (154), Expect = 2e-10
Identities = 35/92 (38%), Positives = 41/92 (44%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
+ G G G PG+PG PG G PG G G+PG RG G +G+PG GQ
Sbjct: 1306 RPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQ----------- 1354
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
PG G PGP G PG GP+
Sbjct: 1355 ----VIGGEGPGLPGRKGDPGPSGPPGPRGPL 1382
Score = 60.5 bits (145), Expect = 2e-09
Identities = 34/90 (37%), Positives = 41/90 (45%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
+DG G G+PGSPG+ GP G PG +G G+ G G G G+ G+RG G
Sbjct: 1451 EDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPG 1510
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GP GP G GR G
Sbjct: 1511 VAGR---------PGAKGPEGPPGPTGRQG 1531
Score = 59.7 bits (143), Expect = 4e-09
Identities = 35/91 (38%), Positives = 40/91 (43%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
+DG+ G G G PG PG G G G G PGVRG G +GD GD G+ G
Sbjct: 1632 RDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGR-------- 1683
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG +GP G G PG GP
Sbjct: 1684 ----------NGSPGSSGPKGDRGEPGPPGP 1704
Score = 59.3 bits (142), Expect = 5e-09
Identities = 34/87 (39%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Frame = +3
Query: 27 GRPGSPGKPGPLGHPGWMGTVGNPGVRGKFG-----ARGDPGDRGQSGNIXXXXXXXXXX 191
G PG G PGP G PG G +G+PG RG G +GD GDRG+ G
Sbjct: 1362 GLPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLPGTAMKGDKGDRGERG---PPGPGEGGI 1418
Query: 192 XXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GP GP+G PG+ G
Sbjct: 1419 APGEPGLPGLPGSPGPQGPVGPPGKKG 1445
Score = 58.9 bits (141), Expect = 7e-09
Identities = 36/93 (38%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNP---GVRGKFGARGDPGDRGQSGNIXXXXXX 179
G G VG PG PG PG G PG G G+ G RG GA G PG G++GN
Sbjct: 1263 GLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRAGNPGTPGAP 1322
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
PG+ GP GP G PG G +
Sbjct: 1323 GLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQV 1355
Score = 58.5 bits (140), Expect = 9e-09
Identities = 38/99 (38%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNP---GVRGKFGARGDPGDRGQSGNIXXXXX 176
DG+ G G G PG+PG GH G MG G P G GK G G GDRG G
Sbjct: 2637 DGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGD 2696
Query: 177 XXXXXXXXXXXXXXFPGDN------GPPGPIGLPGRDGP 275
FPG + GPPGP G G GP
Sbjct: 2697 QGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGP 2735
Score = 57.4 bits (137), Expect = 2e-08
Identities = 34/97 (35%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG PG PG G G +G G PG RG+ G +G+ G++G+ G
Sbjct: 2028 GPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDG----------- 2076
Query: 189 XXXXXXXXXXFPGDNGPPGP--------IGLPGRDGP 275
PG GPPGP GL G GP
Sbjct: 2077 ----PPGLPGTPGPPGPPGPKVSVDEPGPGLSGEQGP 2109
Score = 57.4 bits (137), Expect = 2e-08
Identities = 35/89 (39%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +3
Query: 15 DGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXXXX 194
D VG PGSPG PGP PG G +G PG+ G G G PG G G +
Sbjct: 2370 DPGVGVPGSPGPPGP---PGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGL 2426
Query: 195 XXXXXXXXFPGDNGPPGP---IGLPGRDG 272
PG GPPGP +G PG G
Sbjct: 2427 AGPPGREGIPGPLGPPGPPGSVGPPGASG 2455
Score = 57.0 bits (136), Expect = 3e-08
Identities = 39/120 (32%), Positives = 46/120 (38%), Gaps = 29/120 (24%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGH--------PGWMGTVGNPGVRGKFGA------------ 122
+ G+DG G PG+PG PGP G PG G G PG++G G
Sbjct: 2071 EQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGD 2130
Query: 123 ---------RGDPGDRGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
RG+PG RGQ GN PG+ G GP G PG GP
Sbjct: 2131 RGVPGIKGDRGEPGPRGQDGN------------------PGLPGERGMAGPEGKPGLQGP 2172
Score = 56.2 bits (134), Expect = 4e-08
Identities = 36/93 (38%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGD-----PGDRGQSGNIXXXX 173
G+ G G PG G PGPLG PG G+VG PG G G +GD PG RG+ G
Sbjct: 2422 GERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRGERGE----- 2476
Query: 174 XXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GP G G PG G
Sbjct: 2477 -------PGIRGEDGRPGQEGPRGLTGPPGSRG 2502
Score = 55.8 bits (133), Expect = 6e-08
Identities = 37/109 (33%), Positives = 41/109 (37%), Gaps = 19/109 (17%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKP--------GPLGHPGWMGTVGNPGVRGKFGARGDP---------- 134
G+ G G PG PG P GP G G +G G G G G RG P
Sbjct: 1528 GRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGP 1587
Query: 135 -GDRGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
GD G G I PG GPPGP+G GRDG +
Sbjct: 1588 KGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEV 1636
Score = 55.5 bits (132), Expect = 7e-08
Identities = 35/98 (35%), Positives = 38/98 (38%), Gaps = 9/98 (9%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPL---------GHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNI 161
G G G G PG PGP G PG +G G PG G+ GA G GDRG G
Sbjct: 2218 GLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPG-- 2275
Query: 162 XXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG G PGP+G G GP
Sbjct: 2276 -------------------VPGSPGLPGPVGPKGEPGP 2294
Score = 54.7 bits (130), Expect = 1e-07
Identities = 34/93 (36%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGN-----PGVRGKFGARGDPGDRGQSGNIXXXX 173
G+ G G PGSPG GP+G PG G G+ PG+ G+ G+ G+ G RG G I
Sbjct: 1421 GEPGLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKG 1480
Query: 174 XXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G+ GPPGP G G G
Sbjct: 1481 DRGFPGPLGEAGE---KGERGPPGPAGSRGLPG 1510
Score = 54.3 bits (129), Expect = 2e-07
Identities = 35/97 (36%), Positives = 39/97 (40%), Gaps = 8/97 (8%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+DG G PG G GP G PG G G PG G G G PG G +G
Sbjct: 2147 GQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLK 2206
Query: 189 XXXXXXXXXXFPGDNGPP--------GPIGLPGRDGP 275
PG+ GPP G +GLPG GP
Sbjct: 2207 GE---------PGETGPPGRGLTGPTGAVGLPGPPGP 2234
Score = 53.9 bits (128), Expect = 2e-07
Identities = 35/91 (38%), Positives = 41/91 (45%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
++G G+ G G G+PGP G PG + G PG R K G+PGDRGQ G
Sbjct: 1683 RNGSPGSSGPKGDRGEPGPPGPPGRLVDTG-PGAREK----GEPGDRGQEG---PRGPKG 1734
Query: 183 XXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G GPPGP G PG GP
Sbjct: 1735 DPGLPGAPGERGIEGFRGPPGPQGDPGVRGP 1765
Score = 53.9 bits (128), Expect = 2e-07
Identities = 33/88 (37%), Positives = 36/88 (40%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G+ G PG PG G LG PG G G G G+ G RG+ G G SG
Sbjct: 2374 GVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGRE 2433
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GPPG GL G G
Sbjct: 2434 GIPGPLGPPGPPGSVGPPGASGLKGDKG 2461
Score = 53.5 bits (127), Expect = 3e-07
Identities = 34/89 (38%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G VG GSPG PG +G G G G G GK G RG PG G G
Sbjct: 2233 GPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPG----------- 2281
Query: 189 XXXXXXXXXXFPGDNGP---PGPIGLPGR 266
PG GP PGP G PG+
Sbjct: 2282 ----------LPGPVGPKGEPGPTGAPGQ 2300
Score = 53.5 bits (127), Expect = 3e-07
Identities = 30/88 (34%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +3
Query: 18 GTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGN--IXXXXXXXXXX 191
G G G G PGP G G G G PG G+ G +G PG +G G+ +
Sbjct: 2324 GEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPG 2383
Query: 192 XXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG G PG +G PG+ GP
Sbjct: 2384 PPGVKGDLGLPGLPGAPGVVGFPGQTGP 2411
Score = 53.1 bits (126), Expect = 4e-07
Identities = 39/116 (33%), Positives = 46/116 (39%), Gaps = 25/116 (21%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMG--------TVGNPGVRGKFGA------------ 122
KDG G+ G PGSPG PGP+G G G VG PG +G+ GA
Sbjct: 2267 KDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEP 2326
Query: 123 -----RGDPGDRGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
RG PG RG+ G G G PG +G+PG GP
Sbjct: 2327 GAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPG-VGVPGSPGP 2381
Score = 53.1 bits (126), Expect = 4e-07
Identities = 32/89 (35%), Positives = 36/89 (40%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
DG G G G PG G G PG G+ G PG+RG G +G PG G
Sbjct: 2547 DGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAG------------- 2593
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PGD G PG G+PG G
Sbjct: 2594 -----------IPGDPGSPGKDGVPGIRG 2611
Score = 52.8 bits (125), Expect = 5e-07
Identities = 31/88 (35%), Positives = 37/88 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G+ G PG G GP G PG G G+PG GK G PG RG+ G++
Sbjct: 2569 GDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGSPGKDGV---PGIRGEKGDVGFMGPRGLK 2625
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G+ G G G PGR G
Sbjct: 2626 GERGVKGACGLDGEKGDKGEAGPPGRPG 2653
Score = 52.0 bits (123), Expect = 8e-07
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNP--GVRGKFGARGDPGDRGQSGNIXXXXX 176
++G+DG G G+PG GP G PG G VG P G G G G GDRG++G+
Sbjct: 1867 REGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGS------ 1920
Query: 177 XXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
G+ G PG GL G G +
Sbjct: 1921 ---------------KGEQGLPGERGLRGEPGSV 1939
Score = 52.0 bits (123), Expect = 8e-07
Identities = 32/93 (34%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVR---GKFGARGDPGDRGQSGNIXXXX 173
+ G G G G PG PG G PG G +G G R G+ G +GD G++G+ G
Sbjct: 2651 RPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGG 2710
Query: 174 XXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GP GP GL G+ G
Sbjct: 2711 FPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKG 2743
Score = 51.6 bits (122), Expect = 1e-06
Identities = 37/109 (33%), Positives = 43/109 (39%), Gaps = 19/109 (17%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHP-----------GWMGTVGNPGVRGKFGARGD------- 131
+G G GR G G+PG G P G G VG G RG G +G+
Sbjct: 1521 EGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLV 1580
Query: 132 -PGDRGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PGD G G+ PGD+GPPG G PGR GP
Sbjct: 1581 LPGDPGPKGDPGDRGPIGLTGRAGP------PGDSGPPGEKGDPGRPGP 1623
Score = 51.6 bits (122), Expect = 1e-06
Identities = 34/93 (36%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWM---GTVGNPGVRGKFGARGDPGDRGQSGNIXXXX 173
++G G G PG PG PG G G+ G G+PGVRG G +GD G G G
Sbjct: 1726 QEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDG 1785
Query: 174 XXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G NG G G PGRDG
Sbjct: 1786 KPGAAGP---------SGPNGAAGKAGDPGRDG 1809
Score = 51.2 bits (121), Expect = 1e-06
Identities = 31/81 (38%), Positives = 34/81 (41%)
Frame = +3
Query: 30 RPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXXXXXXXXX 209
R G G G G PG G +G PG RG G RGDPG +G G
Sbjct: 1977 RRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLAL--------------- 2021
Query: 210 XXXFPGDNGPPGPIGLPGRDG 272
G+ GPPGP GL G G
Sbjct: 2022 -----GERGPPGPSGLAGEPG 2037
Score = 50.8 bits (120), Expect = 2e-06
Identities = 36/111 (32%), Positives = 44/111 (39%), Gaps = 22/111 (19%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDP--------------GDRG 146
G+ G G GS G PG G PG G G PG G+ G +G+P G +G
Sbjct: 1495 GERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKG 1554
Query: 147 QSGNI--XXXXXXXXXXXXXXXXXXXFPGDNGPP------GPIGLPGRDGP 275
+ G++ PGD GP GPIGL GR GP
Sbjct: 1555 EKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGP 1605
Score = 50.8 bits (120), Expect = 2e-06
Identities = 35/101 (34%), Positives = 39/101 (38%), Gaps = 15/101 (14%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGP------------LGHPGWMGTVGNPGVRGKF---GARGDPGDR 143
G G G G PG+PGP +G G G G+PG+ GK G RG PG R
Sbjct: 1607 GDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVR 1666
Query: 144 GQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGR 266
G G GD G PGP G PGR
Sbjct: 1667 GPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGR 1707
Score = 49.7 bits (117), Expect = 4e-06
Identities = 30/89 (33%), Positives = 38/89 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G G G G+PG G PG G G G G+ G RG+ G++G+ G
Sbjct: 2022 GERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGE---------- 2071
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G +GPPG G PG GP
Sbjct: 2072 -----------QGRDGPPGLPGTPGPPGP 2089
Score = 49.3 bits (116), Expect = 5e-06
Identities = 30/84 (35%), Positives = 34/84 (40%)
Frame = +3
Query: 24 VGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXXXXXXX 203
+G G PG G G PG G G PG G G G PG+RG+ G
Sbjct: 2021 LGERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGER----------- 2069
Query: 204 XXXXXFPGDNGPPGPIGLPGRDGP 275
G+ G GP GLPG GP
Sbjct: 2070 -------GEQGRDGPPGLPGTPGP 2086
Score = 48.5 bits (114), Expect = 9e-06
Identities = 31/90 (34%), Positives = 35/90 (38%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG G PG G PG G G G RG+ G G+ GD G G+
Sbjct: 1598 GLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGD---------- 1647
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
PG G G G PG GP+
Sbjct: 1648 --------PGLPGKAGERGLRGAPGVRGPV 1669
Score = 48.1 bits (113), Expect = 1e-05
Identities = 33/94 (35%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGH------PGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXX 170
GK G G G+PG GP+G PG G G+PG G G RG+PG G G +
Sbjct: 1652 GKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDT 1711
Query: 171 XXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G GP G GLPG G
Sbjct: 1712 GPGAREKGEPGDRGQ--EGPRGPKGDPGLPGAPG 1743
Score = 48.1 bits (113), Expect = 1e-05
Identities = 31/82 (37%), Positives = 33/82 (40%)
Frame = +3
Query: 27 GRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXXXXXXXX 206
G PG G+ GP G G G G PG RG G RG PG +G G
Sbjct: 1719 GEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPG---------------VR 1763
Query: 207 XXXXFPGDNGPPGPIGLPGRDG 272
GD GPPG G G DG
Sbjct: 1764 GPAGEKGDRGPPGLDGRSGLDG 1785
Score = 48.1 bits (113), Expect = 1e-05
Identities = 33/90 (36%), Positives = 36/90 (40%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PGSPGK G G G G VG G RG G RG G G G
Sbjct: 2590 GAAGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPP 2649
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
G+ G PG G PG++G I
Sbjct: 2650 GRPGLAGHKGEMGEPGVPGQSGAPGKEGLI 2679
Score = 47.4 bits (111), Expect = 2e-05
Identities = 30/89 (33%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGN-IXXXXXXXX 185
GK G GR G+ GK G G P G G+PG+ G G +G+PG G G +
Sbjct: 2254 GKPGAPGRDGASGKDGDRGSP---GVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKG 2310
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G+ G G GLPG G
Sbjct: 2311 EKGAPGGLAGDLVGEPGAKGDRGLPGPRG 2339
Score = 47.0 bits (110), Expect = 3e-05
Identities = 33/92 (35%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNP---GVRGKFGARGDPGDRGQSGNIXXXXXX 179
G+ G G PG G PGP G+ G G G P G RG G +G G+RG G
Sbjct: 2698 GEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGE------- 2750
Query: 180 XXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG G PG G GR GP
Sbjct: 2751 ---------RVVGAPGVPGAPGERGEQGRPGP 2773
Score = 46.6 bits (109), Expect = 3e-05
Identities = 33/92 (35%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGAR--GDPGDRGQSGNIXXXXX 176
+DG G G GSPG PG G PG +G G PG G G G PG +G+ G
Sbjct: 2261 RDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKG------- 2313
Query: 177 XXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
GD G PGP G G G
Sbjct: 2314 APGGLAGDLVGEPGAKGDRGLPGPRGEKGEAG 2345
Score = 46.6 bits (109), Expect = 3e-05
Identities = 34/98 (34%), Positives = 35/98 (35%), Gaps = 9/98 (9%)
Frame = +3
Query: 9 GKDGTVGRPGS--PGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXX 182
G G G PG PG G G PG G G PG G G G PG RG+ G
Sbjct: 2455 GLKGDKGDPGVGLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAG 2514
Query: 183 XXXXXXXXXXXXFP-------GDNGPPGPIGLPGRDGP 275
P GD G GP GL G GP
Sbjct: 2515 LKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDKGP 2552
Score = 46.2 bits (108), Expect = 5e-05
Identities = 32/88 (36%), Positives = 35/88 (39%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G G PG G+ G G PG G G G GK GDPG G G
Sbjct: 1767 GEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGK---AGDPGRDGLPG----------- 1812
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG +GPPG G PG DG
Sbjct: 1813 ----LRGEQGLPGPSGPPGLPGKPGEDG 1836
Score = 45.4 bits (106), Expect = 8e-05
Identities = 31/94 (32%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFG----ARGDPGDRGQSGNIXXX 170
+DG+ G G G G PG G G G VG+ G++G G G PG RG G++
Sbjct: 2482 EDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGER 2541
Query: 171 XXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
GDNG PG G G G
Sbjct: 2542 GPRGLDGDKGPR------GDNGDPGDKGSKGEPG 2569
Score = 43.9 bits (102), Expect = 2e-04
Identities = 25/52 (48%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVR--GKFGARGDPGDRGQSG 155
DG G G PGS G GP G G G G PG R G G G PG+RG+ G
Sbjct: 2718 DGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAPGERGEQG 2769
Score = 42.0 bits (97), Expect = 9e-04
Identities = 29/88 (32%), Positives = 32/88 (36%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G+ G G G G G G PG+ G G G+PG GQSG
Sbjct: 2623 GLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPK 2682
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
GD G G G PG G
Sbjct: 2683 GDRGFDGQPGPKGDQGEKGERGTPGIGG 2710
Score = 41.6 bits (96), Expect = 0.001
Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 17/66 (25%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGN-----------------PGVRGKFGARGDPG 137
G DG+ G PG PG GP G G G G PG RG+ G G G
Sbjct: 2716 GNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAPGERGEQGRPGPAG 2775
Query: 138 DRGQSG 155
RG+ G
Sbjct: 2776 PRGEKG 2781
Score = 39.3 bits (90), Expect = 0.006
Identities = 29/88 (32%), Positives = 31/88 (35%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+DG G G G G G G G G PG+ G G G PG G G
Sbjct: 1851 GEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQ---------- 1900
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
FPG G GP G G G
Sbjct: 1901 ---------GFPGVPGGTGPKGDRGETG 1919
Score = 32.7 bits (73), Expect = 0.52
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGK-----PGPLGHPGWMGTVGNPGVRGKFGARGD 131
+G G G G PG+ PG G PG G G PG G G +G+
Sbjct: 2736 EGLQGQKGERGPPGERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGE 2782
>sp|P02462|CO4A1_HUMAN Collagen alpha 1(IV) chain precursor
Length = 1669
Score = 66.6 bits (161), Expect = 3e-11
Identities = 35/88 (39%), Positives = 40/88 (45%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G +G PG G GP G PG G G PG+ G G RG PG G GN
Sbjct: 55 GLQGVIGFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGN---------- 104
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG +GPPGP G+PG +G
Sbjct: 105 -----PGLPGIPGQDGPPGPPGIPGCNG 127
Score = 63.5 bits (153), Expect = 3e-10
Identities = 33/88 (37%), Positives = 40/88 (45%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G +G PG PG PGP+G PG G G+ G G G RGDPG +G G++
Sbjct: 879 GEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSM 938
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
GD G G IG G G
Sbjct: 939 DKVDMGSMKGQKGDQGEKGQIGPIGEKG 966
Score = 62.8 bits (151), Expect = 5e-10
Identities = 38/96 (39%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Frame = +3
Query: 9 GKDGTVGRPGSPG------KPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXX 170
G+DG G PG PG + GPLG PG G GNPG G G +GDPG+
Sbjct: 112 GQDGPPGPPGIPGCNGTKGERGPLGPPGLPGFAGNPGPPGLPGMKGDPGE---------- 161
Query: 171 XXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
FPG G PGP GLPG GP+
Sbjct: 162 -ILGHVPGMLLKGERGFPGIPGTPGPPGLPGLQGPV 196
Score = 60.1 bits (144), Expect = 3e-09
Identities = 35/88 (39%), Positives = 39/88 (44%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PGSPG PGP G G+ GT G PG+ G+ GA G PG
Sbjct: 646 GPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPG-------------IGFP 692
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PGD GPPG G PG +G
Sbjct: 693 GPPGPKGVDGLPGDMGPPGTPGRPGFNG 720
Score = 59.7 bits (143), Expect = 4e-09
Identities = 34/88 (38%), Positives = 38/88 (43%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G +G PG PG G G PG G G PG +G G G PG +G+ G
Sbjct: 483 GPPGEIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGLIGQPGAKGEPGEF-----YFDL 537
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
FPG G PG G PGRDG
Sbjct: 538 RLKGDKGDPGFPGQPGMPGRAGSPGRDG 565
Score = 58.9 bits (141), Expect = 7e-09
Identities = 35/99 (35%), Positives = 42/99 (42%), Gaps = 11/99 (11%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWM-----------GTVGNPGVRGKFGARGDPGDRGQSG 155
G G G PG PG PGP G PG+ G G PG+ G+ G G+ G++GQ G
Sbjct: 405 GPSGRDGLPGPPGSPGPPGQPGYTNGIVECQPGPPGDQGPPGIPGQPGFIGEIGEKGQKG 464
Query: 156 NIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GPPG IG PG+ G
Sbjct: 465 ESCLICDIDGYRGP--------PGPQGPPGEIGFPGQPG 495
Score = 58.9 bits (141), Expect = 7e-09
Identities = 35/90 (38%), Positives = 39/90 (43%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG PG PG G G MGT G PG G GA G PG++G G
Sbjct: 861 GLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHG----------- 909
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
FPG +GP G GL G G +
Sbjct: 910 ----------FPGSSGPRGDPGLKGDKGDV 929
Score = 58.9 bits (141), Expect = 7e-09
Identities = 35/89 (39%), Positives = 39/89 (43%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G+VG PGSPG PG G G G G PGV+G+ G G PG G +G
Sbjct: 1100 GSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQ---------- 1149
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG G G GLPGR P
Sbjct: 1150 --KGEPGSDGIPGSAGEKGEPGLPGRGFP 1176
Score = 58.9 bits (141), Expect = 7e-09
Identities = 37/102 (36%), Positives = 44/102 (43%), Gaps = 13/102 (12%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTV---GNPGV---RGKFGARGDPGDRGQSGNIXXX 170
G G G PG+PG PGP G PG+ G G+PG+ +G G G PG +G G
Sbjct: 1266 GDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGPKGLPGLQ 1325
Query: 171 XXXXXXXXXXXXXXXXFPGDNGPPGPI-------GLPGRDGP 275
PG GPPGP GLPG +GP
Sbjct: 1326 GIKGDQGDQGVPGAKGLPGPPGPPGPYDIIKGEPGLPGPEGP 1367
Score = 58.2 bits (139), Expect = 1e-08
Identities = 31/88 (35%), Positives = 38/88 (43%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
GK G G+PG G G G PG+ G G PG+ G+ G +G+ G+ G G
Sbjct: 281 GKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGIVIGTGPL 340
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG G PGP G PG G
Sbjct: 341 GEKGERGYPGTPGPRGEPGPKGFPGLPG 368
Score = 58.2 bits (139), Expect = 1e-08
Identities = 35/89 (39%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +3
Query: 3 KDGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPG---DRGQSGNIXXXX 173
K GKDG G GSPG PG G+PG +G G G +G+ G G PG G G
Sbjct: 288 KPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERG 347
Query: 174 XXXXXXXXXXXXXXXFPGDNGPPGPIGLP 260
FPG G PGP GLP
Sbjct: 348 YPGTPGPRGEPGPKGFPGLPGQPGPPGLP 376
Score = 57.4 bits (137), Expect = 2e-08
Identities = 34/88 (38%), Positives = 38/88 (43%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG PGK G G PG G G+PG+ G GA G PG +G G +
Sbjct: 966 GSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGM--------- 1016
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GP G GLPG G
Sbjct: 1017 GLPGTPGEKGVPGIPGPQGSPGLPGDKG 1044
Score = 57.0 bits (136), Expect = 3e-08
Identities = 33/88 (37%), Positives = 40/88 (45%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G+VG G PG PG G PG G G+PG+ G GA+G+ G G G I
Sbjct: 1008 GPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPG-IGIPGLRGEK 1066
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG+ G G IG+PG G
Sbjct: 1067 GDQGIAGFPGSPGEKGEKGSIGIPGMPG 1094
Score = 56.6 bits (135), Expect = 3e-08
Identities = 33/88 (37%), Positives = 41/88 (46%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G+ G++G PG PG PG G PG +G G+PG+ G+ G +G PG G G
Sbjct: 1082 GEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPG----------- 1130
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GP G G PG DG
Sbjct: 1131 -VKGEAGLPGTPGPTGPAGQKGEPGSDG 1157
Score = 55.8 bits (133), Expect = 6e-08
Identities = 33/103 (32%), Positives = 39/103 (37%), Gaps = 14/103 (13%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDP--------------GDR 143
DG G G G PG PGP G G G G+ G+ G G +G+P GD+
Sbjct: 1126 DGIPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDK 1185
Query: 144 GQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G G + F G GP G GLPG G
Sbjct: 1186 GSKGEVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPG 1228
Score = 55.1 bits (131), Expect = 1e-07
Identities = 32/83 (38%), Positives = 36/83 (43%)
Frame = +3
Query: 18 GTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXXXXX 197
G G PG PG PGP G PG G VG PG G G G PG G+ G +
Sbjct: 173 GERGFPGIPGTPGPPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGD-- 230
Query: 198 XXXXXXXFPGDNGPPGPIGLPGR 266
GD G GP G+PG+
Sbjct: 231 --------KGDQGVSGPPGVPGQ 245
Score = 55.1 bits (131), Expect = 1e-07
Identities = 37/93 (39%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PG PG PG G PG G G PG +G G+ G G+RG G +
Sbjct: 541 GDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGV--------- 591
Query: 189 XXXXXXXXXXFP---GDNGPPGPIGLPGRDGPI 278
FP GD GPPGP G G GPI
Sbjct: 592 ---------GFPGSRGDTGPPGPPGY-GPAGPI 614
Score = 54.7 bits (130), Expect = 1e-07
Identities = 34/86 (39%), Positives = 38/86 (44%)
Frame = +3
Query: 18 GTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXXXXX 197
G G G PG PG G PG G++G PGV G+ GA G PG +G G
Sbjct: 737 GLPGLKGLPGLPGIPGTPGEKGSIGVPGVPGEHGAIGPPGLQGIRGEPGPPGLPGSVGSP 796
Query: 198 XXXXXXXFPGDNGPPGPIGLPGRDGP 275
PG GPPG G PG GP
Sbjct: 797 GVPGIGP-PGARGPPGGQGPPGLSGP 821
Score = 54.7 bits (130), Expect = 1e-07
Identities = 31/88 (35%), Positives = 36/88 (40%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G PGSPG+ G G G G G+PG++G G+ G PG G G
Sbjct: 1067 GDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLD 1126
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GP GP G G G
Sbjct: 1127 GIPGVKGEAGLPGTPGPTGPAGQKGEPG 1154
Score = 54.7 bits (130), Expect = 1e-07
Identities = 37/113 (32%), Positives = 42/113 (37%), Gaps = 24/113 (21%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPL---------------GHPGWMGTVGNPGVRGKFGARGDPGDR 143
G G G+PG PG PGP+ G+PGW G G PG +G G +G PG
Sbjct: 1236 GDRGPQGQPGLPGLPGPMGPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIG 1295
Query: 144 GQSGNIXXXXXXXXXXXXXXXXXXXFP---------GDNGPPGPIGLPGRDGP 275
G G P GD G PG GLPG GP
Sbjct: 1296 GSPGITGSKGDMGPPGVPGFQGPKGLPGLQGIKGDQGDQGVPGAKGLPGPPGP 1348
Score = 54.3 bits (129), Expect = 2e-07
Identities = 33/89 (37%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Frame = +3
Query: 27 GRPGSPGKPGPLGHPGWMGTVGNPGVRGKF-------GARGDPGDRGQSGNIXXXXXXXX 185
G PG G PG G PG++G +G G +G+ G RG PG +G G I
Sbjct: 437 GPPGDQGPPGIPGQPGFIGEIGEKGQKGESCLICDIDGYRGPPGPQGPPGEI-------- 488
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
FPG G G GLPGRDG
Sbjct: 489 ----------GFPGQPGAKGDRGLPGRDG 507
Score = 53.9 bits (128), Expect = 2e-07
Identities = 36/97 (37%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGT--------VGNPGVRGKFGARGDPGDRGQSGNI 161
DG G +G PG+PG+PG G PG G VG PG++G G G PG G+ G+I
Sbjct: 701 DGLPGDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSI 760
Query: 162 XXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
G G PGP GLPG G
Sbjct: 761 ---GVPGVPGEHGAIGPPGLQGIRGEPGPPGLPGSVG 794
Score = 53.9 bits (128), Expect = 2e-07
Identities = 35/89 (39%), Positives = 38/89 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G +G G G G PGP G G G VG PG G G G PG +G+ G
Sbjct: 1363 GPEGPPGLKGLQGLPGPKGQQGVTGLVGIPGPPGIPGFDGAPGQKGEMG----------- 1411
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
FP GPPGP GLPG GP
Sbjct: 1412 -PAGPTGPRGFP---GPPGPDGLPGSMGP 1436
Score = 53.5 bits (127), Expect = 3e-07
Identities = 38/107 (35%), Positives = 45/107 (42%), Gaps = 17/107 (15%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGT---------VGNPGVRGKFGARGDP--------G 137
G+ G+ GR G PG PGP G PG +G VG PG RG G G P G
Sbjct: 556 GRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDTGPPGPPGYGPAGPIG 615
Query: 138 DRGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
D+GQ+G PG G PGP G PG+ P+
Sbjct: 616 DKGQAG------------------FPGGPGSPGLPGPKGEPGKIVPL 644
Score = 52.4 bits (124), Expect = 6e-07
Identities = 36/89 (40%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHP--GWMGTVGNPGVRGKFGARGDPGDR--GQSGNIXXXXX 176
G+ G G PG PG+PGP G P G G G PG RG+ G RG PG G SG
Sbjct: 356 GEPGPKGFPGLPGQPGPPGLPVPGQAGAPGFPGERGEKGDRGFPGTSLPGPSGR------ 409
Query: 177 XXXXXXXXXXXXXXFPGDNGPPGPIGLPG 263
PG G PGP G PG
Sbjct: 410 ------------DGLPGPPGSPGPPGQPG 426
Score = 52.4 bits (124), Expect = 6e-07
Identities = 32/90 (35%), Positives = 38/90 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G G G +G PG G+ G PG +G+ G G PG +GQ G
Sbjct: 1174 GFPGFPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQPG----------L 1223
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
GD GP G GLPG GP+
Sbjct: 1224 PGSPGHATEGPKGDRGPQGQPGLPGLPGPM 1253
Score = 52.0 bits (123), Expect = 8e-07
Identities = 36/93 (38%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Frame = +3
Query: 9 GKDGTVGRPGS--PGKPGPLGH---PGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXX 173
G+ G VG+PG PG PGP G PG MG G PG G G G+PG +GQ G
Sbjct: 679 GEKGAVGQPGIGFPGPPGPKGVDGLPGDMGPPGTPGRPGFNGLPGNPGVQGQKGE----P 734
Query: 174 XXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG G G IG+PG G
Sbjct: 735 GVGLPGLKGLPGLPGIPGTPGEKGSIGVPGVPG 767
Score = 52.0 bits (123), Expect = 8e-07
Identities = 31/87 (35%), Positives = 36/87 (41%)
Frame = +3
Query: 18 GTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXXXXX 197
G G G G+ GP+G G G G PGV GK G G PG G G+
Sbjct: 948 GQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGD------------- 994
Query: 198 XXXXXXXFPGDNGPPGPIGLPGRDGPI 278
PG +G PG GLPG G +
Sbjct: 995 --------PGISGTPGAPGLPGPKGSV 1013
Score = 50.4 bits (119), Expect = 2e-06
Identities = 34/91 (37%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTV-GNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
G+ G G PGSPG PGP G PG + + G PG G G+ G PG +G G
Sbjct: 618 GQAGFPGGPGSPGLPGPKGEPGKIVPLPGPPGAEGLPGSPGFPGPQGDRG---------- 667
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
FPG G P GLPG G +
Sbjct: 668 -----------FPGTPGRP---GLPGEKGAV 684
Score = 50.1 bits (118), Expect = 3e-06
Identities = 37/115 (32%), Positives = 44/115 (38%), Gaps = 27/115 (23%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGK-----------FGARGDPGDRGQSG 155
G GT G PG PG GP+G PG+ G G PG G G +GD GD+G SG
Sbjct: 179 GIPGTPGPPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSG 238
Query: 156 --------NIXXXXXXXXXXXXXXXXXXXF--------PGDNGPPGPIGLPGRDG 272
+ F G+ G PGP G PG+DG
Sbjct: 239 PPGVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDG 293
Score = 49.3 bits (116), Expect = 5e-06
Identities = 35/96 (36%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Frame = +3
Query: 9 GKDGTVGRPGSPG--KPGPLGH------PGWMGTVGNPGVRGKFGARGDPGDRGQSGNIX 164
G G G PG PG PGP G PG G G PG+ G+ GA G PG G G +
Sbjct: 823 GIKGEKGFPGFPGLDMPGPKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMG 882
Query: 165 XXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG G PGP+G PG G
Sbjct: 883 VMGT---------------PGQPGSPGPVGAPGLPG 903
Score = 48.9 bits (115), Expect = 7e-06
Identities = 30/90 (33%), Positives = 38/90 (42%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G T G G G+PG G PG +G G PG G G G GD+G+ G+
Sbjct: 252 GDFATKGEKGQKGEPGFQGMPG-VGEKGEPGKPGPRGKPGKDGDKGEKGSPGFPGEPGYP 310
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDGPI 278
G+ GPPGP G+ GP+
Sbjct: 311 GLIGRQGPQGEKGEAGPPGPPGIVIGTGPL 340
Score = 48.9 bits (115), Expect = 7e-06
Identities = 32/88 (36%), Positives = 35/88 (39%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXXX 188
G G G G G PG G PG G+ G G G G +G PG G G+
Sbjct: 1180 GAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGH----ATEGPK 1235
Query: 189 XXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
PG GP GP GLPG DG
Sbjct: 1236 GDRGPQGQPGLPGLPGPMGPPGLPGIDG 1263
Score = 47.8 bits (112), Expect = 2e-05
Identities = 31/90 (34%), Positives = 36/90 (40%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSGNIXXXXXXXX 185
+G G G G PG P G PG MG G PG+ G G +G+PG G G
Sbjct: 1232 EGPKGDRGPQGQPGLP---GLPGPMGPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGF 1288
Query: 186 XXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G G GP G+PG GP
Sbjct: 1289 QGMPGIGGSPGITGSKGDMGPPGVPGFQGP 1318
Score = 47.4 bits (111), Expect = 2e-05
Identities = 32/103 (31%), Positives = 37/103 (35%), Gaps = 15/103 (14%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPL---------------GHPGWMGTVGNPGVRGKFGARGDPGDR 143
G G G G PGKPG + G G +G +G G RG G G PG
Sbjct: 921 GLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKD 980
Query: 144 GQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
GQ+G PG G G +GLPG G
Sbjct: 981 GQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPG 1023
Score = 45.8 bits (107), Expect = 6e-05
Identities = 33/104 (31%), Positives = 41/104 (39%), Gaps = 16/104 (15%)
Frame = +3
Query: 9 GKDGTVGRPGSPG--KPGPLGHPGWMGTVG---NPGVRGKF-----------GARGDPGD 140
G G+VG PG PG PG G PG G G PG++G+ G +GD G
Sbjct: 788 GLPGSVGSPGVPGIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMPGPKGDKGA 847
Query: 141 RGQSGNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDG 272
+G G FPG G G +G PG+ G
Sbjct: 848 QGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPG 891
Score = 45.4 bits (106), Expect = 8e-05
Identities = 32/101 (31%), Positives = 40/101 (39%), Gaps = 10/101 (9%)
Frame = +3
Query: 3 KDGKDGTVGRPGSP---GKPGPLGHPG-------WMGTVGNPGVRGKFGARGDPGDRGQS 152
+DG G G G+P G+PG G PG G G+PG G+ G G G G+
Sbjct: 505 RDGVAGVPGPQGTPGLIGQPGAKGEPGEFYFDLRLKGDKGDPGFPGQPGMPGRAGSPGRD 564
Query: 153 GNIXXXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G+ PG G PG +GL G GP
Sbjct: 565 GH------------------PGLPGPKGSPGSVGLKGERGP 587
Score = 42.7 bits (99), Expect = 5e-04
Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 8/97 (8%)
Frame = +3
Query: 9 GKDGTVGRPGS--PGKPGPLGHPGWMGTVGNPGVRGKFGA------RGDPGDRGQSGNIX 164
G+ G G PG PG G G G G G+PG +G+ G+ G PG +G G++
Sbjct: 1047 GEKGQAGPPGIGIPGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVG 1106
Query: 165 XXXXXXXXXXXXXXXXXXFPGDNGPPGPIGLPGRDGP 275
G G G GLPG GP
Sbjct: 1107 YPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGP 1143
Score = 35.4 bits (80), Expect = 0.080
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPG 137
G G G PG G+ GP G G G G PG G G+ G PG
Sbjct: 1396 GIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPPG 1438
Score = 35.4 bits (80), Expect = 0.080
Identities = 17/32 (53%), Positives = 17/32 (53%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGV 104
G G G G PG PGP G PG MG G P V
Sbjct: 1411 GPAGPTGPRGFPGPPGPDGLPGSMGPPGTPSV 1442
Score = 34.7 bits (78), Expect = 0.14
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDP 134
G DG G+ G G GP G G+ G G G+ G G G P
Sbjct: 1399 GFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPPGTP 1440
Score = 33.9 bits (76), Expect = 0.23
Identities = 20/49 (40%), Positives = 20/49 (40%)
Frame = +3
Query: 9 GKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFGARGDPGDRGQSG 155
G G G PG G PG G G G G G G G G PG G G
Sbjct: 1390 GIPGPPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPPG 1438
Score = 31.6 bits (70), Expect = 1.2
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = +3
Query: 6 DGKDGTVGRPGSPGKPGPLGHPGWMGTVGNPGVRGKFG 119
DG G G G G GP G PG G G PG G G
Sbjct: 1401 DGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPPG 1438
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,479,770
Number of Sequences: 369166
Number of extensions: 1159849
Number of successful extensions: 30874
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11268
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3304927425
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)