Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_B22
(232 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P48060|GLIP1_HUMAN Glioma pathogenesis-related protein 1... 62 5e-10
sp|P54108|CRIS3_HUMAN Cysteine-rich secretory protein 3 pre... 62 5e-10
sp|O19010|CRIS3_HORSE Cysteine-rich secretory protein 3 pre... 59 4e-09
sp|P12020|CRIS1_RAT Cysteine-rich secretory protein 1 precu... 57 2e-08
sp|Q8JGT9|CRVP_RHATT Tigrin precursor 57 2e-08
sp|P60623|CRVP_TRIST Cysteine-rich secretory protein precur... 56 2e-08
sp|Q7ZT99|CRVP_CROAT Catrin-1/2 precursor 56 3e-08
sp|Q8JI39|CRVP_TRIFL Triflin precursor 55 5e-08
sp|Q03401|CRIS1_MOUSE Cysteine-rich secretory protein 1 pre... 54 9e-08
sp|Q7ZZN9|CRVP_TRIJE Cysteine-rich venom protein precursor ... 54 1e-07
>sp|P48060|GLIP1_HUMAN Glioma pathogenesis-related protein 1 precursor (GliPR 1) (RTVP-1
protein)
Length = 266
Score = 61.6 bits (148), Expect = 5e-10
Identities = 30/67 (44%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +3
Query: 6 VAWAKSQELGCGAANC-KYKTFDVVM----LFCNYAPGGNYAGQLPYENGKACATCPTNT 170
V WA S ++GC C K FD + CNY PGGNY PY+ G C+ CP N
Sbjct: 141 VVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGNYP-TWPYKRGATCSACPNND 199
Query: 171 KCDDGLC 191
KC D LC
Sbjct: 200 KCLDNLC 206
>sp|P54108|CRIS3_HUMAN Cysteine-rich secretory protein 3 precursor (CRISP-3) (SGP28
protein)
Length = 245
Score = 61.6 bits (148), Expect = 5e-10
Identities = 30/64 (46%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 6 VAWAKSQELGCGAANCKYKTFDVVMLFCNYAPGGNYAGQL--PYENGKACATCPTNTKCD 179
V W S +GCG A C + C Y P GN+A +L PYE G CA+CP N CD
Sbjct: 142 VVWYSSYLVGCGNAYCPNQKVLKYYYVCQYCPAGNWANRLYVPYEQGAPCASCPDN--CD 199
Query: 180 DGLC 191
DGLC
Sbjct: 200 DGLC 203
>sp|O19010|CRIS3_HORSE Cysteine-rich secretory protein 3 precursor (CRISP-3)
Length = 245
Score = 58.9 bits (141), Expect = 4e-09
Identities = 28/64 (43%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 6 VAWAKSQELGCGAANCKYKTFDVVMLFCNYAPGGNYAGQL--PYENGKACATCPTNTKCD 179
V W S +GCG A C + C Y P GNY ++ PYE G CA CP N CD
Sbjct: 142 VVWYSSYRVGCGIAYCPKQGTLKYYYVCQYCPAGNYVNKINTPYEQGTPCARCPGN--CD 199
Query: 180 DGLC 191
+GLC
Sbjct: 200 NGLC 203
>sp|P12020|CRIS1_RAT Cysteine-rich secretory protein 1 precursor (Sperm-coating
glycoprotein) (SCP) (Acidic epididymal glycoprotein)
(Protein D) (Protein E) (Protein IV) (Sialoprotein) (32
kDa epididymal protein)
Length = 246
Score = 56.6 bits (135), Expect = 2e-08
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +3
Query: 6 VAWAKSQELGCGAANCKYKTFDVVMLFCNYAPGGNYAGQL--PYENGKACATCPTNTKCD 179
V W + + CG A C + + C+Y PGGNY G+L PY G+ C +CP N C+
Sbjct: 144 VVWNSTFLVACGVAECPDQPLKYFYV-CHYCPGGNYVGRLYSPYTEGEPCDSCPGN--CE 200
Query: 180 DGLC 191
DGLC
Sbjct: 201 DGLC 204
>sp|Q8JGT9|CRVP_RHATT Tigrin precursor
Length = 237
Score = 56.6 bits (135), Expect = 2e-08
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 6 VAWAKSQELGCGAANCKYKTFDVVMLFCNYAPGGNYAG--QLPYENGKACATCPTNTKCD 179
+ W KS +GC AA C ++ + C Y P GN G PY +G CA CP+N CD
Sbjct: 137 IVWYKSYLVGCAAAYCPSSLYNYFYV-CQYCPAGNIQGSTSTPYASGPTCADCPSN--CD 193
Query: 180 DGLC 191
+GLC
Sbjct: 194 NGLC 197
>sp|P60623|CRVP_TRIST Cysteine-rich secretory protein precursor (Stecrisp)
Length = 233
Score = 56.2 bits (134), Expect = 2e-08
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 6 VAWAKSQELGCGAANCKYKTFDVVMLFCNYAPGGNYAGQ--LPYENGKACATCPTNTKCD 179
+ W KS +GC AA C + + C Y P GN+ G+ PY +G C CP++ CD
Sbjct: 131 IVWYKSYRIGCAAAYCPSSPYSYFFV-CQYCPAGNFIGKTATPYTSGTPCGDCPSD--CD 187
Query: 180 DGLC 191
+GLC
Sbjct: 188 NGLC 191
>sp|Q7ZT99|CRVP_CROAT Catrin-1/2 precursor
Length = 240
Score = 55.8 bits (133), Expect = 3e-08
Identities = 30/67 (44%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 6 VAWAKSQELGCGAANC---KYKTFDVVMLFCNYAPGGNYAGQ--LPYENGKACATCPTNT 170
V W KS +GC AA C KY F V C Y P GN G+ PY++G C CP +
Sbjct: 138 VVWYKSYRIGCAAAYCPSSKYSYFYV----CQYCPAGNIIGKTATPYKSGPPCGDCP--S 191
Query: 171 KCDDGLC 191
CD+GLC
Sbjct: 192 ACDNGLC 198
>sp|Q8JI39|CRVP_TRIFL Triflin precursor
Length = 240
Score = 55.1 bits (131), Expect = 5e-08
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 6 VAWAKSQELGCGAANC---KYKTFDVVMLFCNYAPGGNYAGQ--LPYENGKACATCPTNT 170
+ W KS GC AA C KY F V C Y P GN G+ PY++G C CP++
Sbjct: 138 IVWYKSYRAGCAAAYCPSSKYSYFYV----CQYCPAGNIIGKTATPYKSGPPCGDCPSD- 192
Query: 171 KCDDGLC 191
CD+GLC
Sbjct: 193 -CDNGLC 198
>sp|Q03401|CRIS1_MOUSE Cysteine-rich secretory protein 1 precursor (CRISP-1) (Acidic
epididymal glycoprotein 1) (Sperm-coating glycoprotein
1) (SCP 1)
Length = 244
Score = 54.3 bits (129), Expect = 9e-08
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +3
Query: 6 VAWAKSQELGCGAANCKYKTFDVVMLFCNYAPGGNYAGQL--PYENGKACATCPTNTKCD 179
V W + ++ CG A C + C+Y P GNY G+L PY G+ CA+CP + C+
Sbjct: 142 VVWNSTFQVACGVAECPKNPLRYYYV-CHYCPVGNYQGRLYTPYTAGEPCASCPDH--CE 198
Query: 180 DGLC 191
DGLC
Sbjct: 199 DGLC 202
>sp|Q7ZZN9|CRVP_TRIJE Cysteine-rich venom protein precursor (TJ-CRVP)
Length = 240
Score = 53.9 bits (128), Expect = 1e-07
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 6 VAWAKSQELGCGAANC---KYKTFDVVMLFCNYAPGGNYAGQ--LPYENGKACATCPTNT 170
+ W KS +GC AA C +Y F V C Y P GN G+ PY +G C CP++
Sbjct: 138 IVWYKSYRIGCAAAYCPSAEYSYFYV----CQYCPAGNMIGKTATPYTSGPPCGDCPSD- 192
Query: 171 KCDDGLC 191
CD+GLC
Sbjct: 193 -CDNGLC 198
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,944,673
Number of Sequences: 369166
Number of extensions: 570050
Number of successful extensions: 1582
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1530
length of database: 68,354,980
effective HSP length: 47
effective length of database: 59,672,435
effective search space used: 1730500615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)