Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_014_F03
(316 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 47 1e-05
sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein 44 2e-04
sp|P17804|HSP70_LEIDO Heat shock 70 kDa protein 43 2e-04
sp|Q07437|HSP70_LEIAM Heat shock 70 kDa protein 43 2e-04
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 43 3e-04
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 42 3e-04
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 42 3e-04
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 42 3e-04
sp|P08106|HSP70_CHICK Heat shock 70 kDa protein (HSP70) 42 3e-04
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 42 3e-04
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 47.0 bits (110), Expect = 1e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +2
Query: 2 YEHHQKELEKVCNPIMTKFYQ 64
YEHHQKELEKVCNPI+TK YQ
Sbjct: 592 YEHHQKELEKVCNPIITKLYQ 612
>sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein
Length = 654
Score = 43.5 bits (101), Expect = 2e-04
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 2 YEHHQKELEKVCNPIMTKFYQ 64
YEH QKELEKVCNPI+TK YQ
Sbjct: 599 YEHKQKELEKVCNPIITKLYQ 619
>sp|P17804|HSP70_LEIDO Heat shock 70 kDa protein
Length = 653
Score = 43.1 bits (100), Expect = 2e-04
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +2
Query: 2 YEHHQKELEKVCNPIMTKFYQ 64
YEH QKELE VCNPIMTK YQ
Sbjct: 594 YEHKQKELESVCNPIMTKMYQ 614
>sp|Q07437|HSP70_LEIAM Heat shock 70 kDa protein
Length = 652
Score = 43.1 bits (100), Expect = 2e-04
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +2
Query: 2 YEHHQKELEKVCNPIMTKFYQ 64
YEH QKELE VCNPIMTK YQ
Sbjct: 595 YEHKQKELENVCNPIMTKMYQ 615
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 42.7 bits (99), Expect = 3e-04
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2
Query: 2 YEHHQKELEKVCNPIMTKFYQ 64
YEH QK+LEKVCNPI+TK YQ
Sbjct: 592 YEHQQKDLEKVCNPIITKLYQ 612
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 42.4 bits (98), Expect = 3e-04
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2
Query: 2 YEHHQKELEKVCNPIMTKFYQ 64
+EH QKELEKVCNPI+TK YQ
Sbjct: 592 FEHQQKELEKVCNPIITKLYQ 612
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 42.4 bits (98), Expect = 3e-04
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2
Query: 2 YEHHQKELEKVCNPIMTKFYQ 64
+EH QKELEKVCNPI+TK YQ
Sbjct: 592 FEHQQKELEKVCNPIITKLYQ 612
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 42.4 bits (98), Expect = 3e-04
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2
Query: 2 YEHHQKELEKVCNPIMTKFYQ 64
+EH QKELEKVCNPI+TK YQ
Sbjct: 592 FEHQQKELEKVCNPIITKLYQ 612
>sp|P08106|HSP70_CHICK Heat shock 70 kDa protein (HSP70)
Length = 634
Score = 42.4 bits (98), Expect = 3e-04
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2
Query: 2 YEHHQKELEKVCNPIMTKFYQ 64
YEH QKELEK+CNPI+TK YQ
Sbjct: 595 YEHKQKELEKLCNPIVTKLYQ 615
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 42.4 bits (98), Expect = 3e-04
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2
Query: 2 YEHHQKELEKVCNPIMTKFYQ 64
+EH QKELEKVCNPI+TK YQ
Sbjct: 592 FEHQQKELEKVCNPIITKLYQ 612
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,852,153
Number of Sequences: 369166
Number of extensions: 507983
Number of successful extensions: 1343
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 68,354,980
effective HSP length: 73
effective length of database: 54,869,325
effective search space used: 1700949075
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)