Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_013_J17
(770 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin) 476 e-134
sp|P30883|TBB4_XENLA Tubulin beta-4 chain 476 e-134
sp|P68372|TBBX_MOUSE Tubulin beta-? chain >gi|55977480|sp|P... 476 e-134
sp|Q24560|TBB1_DROME Tubulin beta-1 chain (Beta-1 tubulin) 474 e-133
sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain >gi|56754798|sp|P... 474 e-133
sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin) 473 e-133
sp|P02554|TBB_PIG Tubulin beta chain 472 e-133
sp|O17449|TBB1_MANSE Tubulin beta-1 chain (Beta-1 tubulin) 472 e-133
sp|P36221|TBB1_NOTCO Tubulin beta-1 chain (Beta-1 tubulin) 471 e-133
sp|P41937|TBB4_CAEEL Tubulin beta-4 chain (Beta-4 tubulin) 471 e-132
>sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin)
Length = 447
Score = 476 bits (1224), Expect = e-134
Identities = 232/256 (90%), Positives = 237/256 (92%)
Frame = +1
Query: 1 VYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGAGNNWAKGHYTE 180
VYYNEA+GGKYVPRAVLVDLEPGTMDSVR+GPFGQ+FRPDNF+FGQSGAGNNWAKGHYTE
Sbjct: 49 VYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE 108
Query: 181 GAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFS 360
GAELVDSVLDVVRKEAESCDCLQGFQ KIREEYPDRIMNTFS
Sbjct: 109 GAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFS 168
Query: 361 VVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHL 540
VVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHL
Sbjct: 169 VVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHL 228
Query: 541 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 720
VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE
Sbjct: 229 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 288
Query: 721 LTQQMFDAKNMMAACD 768
LTQQMFDAKNMMAACD
Sbjct: 289 LTQQMFDAKNMMAACD 304
>sp|P30883|TBB4_XENLA Tubulin beta-4 chain
Length = 445
Score = 476 bits (1224), Expect = e-134
Identities = 232/256 (90%), Positives = 237/256 (92%)
Frame = +1
Query: 1 VYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGAGNNWAKGHYTE 180
VYYNEA+GGKYVPRAVLVDLEPGTMDSVR+GPFGQ+FRPDNF+FGQSGAGNNWAKGHYTE
Sbjct: 49 VYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE 108
Query: 181 GAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFS 360
GAELVDSVLDVVRKEAESCDCLQGFQ KIREEYPDRIMNTFS
Sbjct: 109 GAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFS 168
Query: 361 VVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHL 540
VVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHL
Sbjct: 169 VVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHL 228
Query: 541 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 720
VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE
Sbjct: 229 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 288
Query: 721 LTQQMFDAKNMMAACD 768
LTQQMFDAKNMMAACD
Sbjct: 289 LTQQMFDAKNMMAACD 304
>sp|P68372|TBBX_MOUSE Tubulin beta-? chain
sp|P68371|TBBX_HUMAN Tubulin beta-? chain (Tubulin beta-2 chain)
Length = 445
Score = 476 bits (1224), Expect = e-134
Identities = 232/256 (90%), Positives = 237/256 (92%)
Frame = +1
Query: 1 VYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGAGNNWAKGHYTE 180
VYYNEA+GGKYVPRAVLVDLEPGTMDSVR+GPFGQ+FRPDNF+FGQSGAGNNWAKGHYTE
Sbjct: 49 VYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE 108
Query: 181 GAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFS 360
GAELVDSVLDVVRKEAESCDCLQGFQ KIREEYPDRIMNTFS
Sbjct: 109 GAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFS 168
Query: 361 VVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHL 540
VVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHL
Sbjct: 169 VVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHL 228
Query: 541 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 720
VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE
Sbjct: 229 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 288
Query: 721 LTQQMFDAKNMMAACD 768
LTQQMFDAKNMMAACD
Sbjct: 289 LTQQMFDAKNMMAACD 304
>sp|Q24560|TBB1_DROME Tubulin beta-1 chain (Beta-1 tubulin)
Length = 447
Score = 474 bits (1219), Expect = e-133
Identities = 231/256 (90%), Positives = 236/256 (92%)
Frame = +1
Query: 1 VYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGAGNNWAKGHYTE 180
VYYNEASGGKYVPRAVLVDLEPGTMDSVR+GPFGQ+FRPDNF+FGQSGAGNNWAKGHYTE
Sbjct: 49 VYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE 108
Query: 181 GAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFS 360
GAELVDSVLDVVRKEAESCDCLQGFQ KIREEYPDRIMNT+S
Sbjct: 109 GAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYS 168
Query: 361 VVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHL 540
VVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHL
Sbjct: 169 VVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHL 228
Query: 541 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 720
VS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE
Sbjct: 229 VSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 288
Query: 721 LTQQMFDAKNMMAACD 768
LTQQMFDAKNMMAACD
Sbjct: 289 LTQQMFDAKNMMAACD 304
>sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain
sp|P69895|TBB2_MACMU Tubulin beta-2 chain
sp|P07437|TBB2_HUMAN Tubulin beta-2 chain
sp|P09244|TBB7_CHICK Tubulin beta-7 chain (Tubulin beta 4')
sp|P99024|TBB5_MOUSE Tubulin beta-5 chain
sp|P69897|TBB5_RAT Tubulin beta-5 chain
sp|P69893|TBB1_CRIGR Tubulin beta-1 chain (Beta-tubulin isotype I) (Class I beta
tubulin)
Length = 444
Score = 474 bits (1219), Expect = e-133
Identities = 230/256 (89%), Positives = 237/256 (92%)
Frame = +1
Query: 1 VYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGAGNNWAKGHYTE 180
VYYNEA+GGKYVPRA+LVDLEPGTMDSVR+GPFGQ+FRPDNF+FGQSGAGNNWAKGHYTE
Sbjct: 49 VYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE 108
Query: 181 GAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFS 360
GAELVDSVLDVVRKEAESCDCLQGFQ KIREEYPDRIMNTFS
Sbjct: 109 GAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFS 168
Query: 361 VVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHL 540
VVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHL
Sbjct: 169 VVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHL 228
Query: 541 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 720
VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE
Sbjct: 229 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 288
Query: 721 LTQQMFDAKNMMAACD 768
LTQQ+FDAKNMMAACD
Sbjct: 289 LTQQVFDAKNMMAACD 304
>sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin)
Length = 445
Score = 473 bits (1216), Expect = e-133
Identities = 231/256 (90%), Positives = 236/256 (92%)
Frame = +1
Query: 1 VYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGAGNNWAKGHYTE 180
VYYNEA+GGKYVPRAVLVDLEPGTMDSVR+G FGQ+FRPDNF+FGQSGAGNNWAKGHYTE
Sbjct: 49 VYYNEATGGKYVPRAVLVDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYTE 108
Query: 181 GAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFS 360
GAELVDSVLDVVRKEAESCDCLQGFQ KIREEYPDRIMNTFS
Sbjct: 109 GAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFS 168
Query: 361 VVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHL 540
VVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHL
Sbjct: 169 VVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHL 228
Query: 541 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 720
VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE
Sbjct: 229 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 288
Query: 721 LTQQMFDAKNMMAACD 768
LTQQMFDAKNMMAACD
Sbjct: 289 LTQQMFDAKNMMAACD 304
>sp|P02554|TBB_PIG Tubulin beta chain
Length = 445
Score = 472 bits (1214), Expect = e-133
Identities = 229/256 (89%), Positives = 236/256 (92%)
Frame = +1
Query: 1 VYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGAGNNWAKGHYTE 180
VYYNEA+G KYVPRA+LVDLEPGTMDSVR+GPFGQ+FRPDNF+FGQSGAGNNWAKGHYTE
Sbjct: 49 VYYNEAAGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE 108
Query: 181 GAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFS 360
GAELVDSVLDVVRKE+ESCDCLQGFQ KIREEYPDRIMNTFS
Sbjct: 109 GAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFS 168
Query: 361 VVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHL 540
VVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHL
Sbjct: 169 VVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHL 228
Query: 541 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 720
VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE
Sbjct: 229 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 288
Query: 721 LTQQMFDAKNMMAACD 768
LTQQMFDAKNMMAACD
Sbjct: 289 LTQQMFDAKNMMAACD 304
>sp|O17449|TBB1_MANSE Tubulin beta-1 chain (Beta-1 tubulin)
Length = 447
Score = 472 bits (1214), Expect = e-133
Identities = 229/256 (89%), Positives = 236/256 (92%)
Frame = +1
Query: 1 VYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGAGNNWAKGHYTE 180
VYYNEASGGKYVPRA+LVDLEPGTMDSVR+GPFGQ+FRPDNF+FGQSGAGNNWAKGHYTE
Sbjct: 49 VYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE 108
Query: 181 GAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFS 360
GAELVDSVLDVVRKEAESCDCLQGFQ KIREEYPDRIMNT+S
Sbjct: 109 GAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYS 168
Query: 361 VVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHL 540
VVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL+TPTYGDLNHL
Sbjct: 169 VVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHL 228
Query: 541 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 720
VS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE
Sbjct: 229 VSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 288
Query: 721 LTQQMFDAKNMMAACD 768
LTQQMFDAKNMMAACD
Sbjct: 289 LTQQMFDAKNMMAACD 304
>sp|P36221|TBB1_NOTCO Tubulin beta-1 chain (Beta-1 tubulin)
Length = 446
Score = 471 bits (1212), Expect = e-133
Identities = 229/256 (89%), Positives = 235/256 (91%)
Frame = +1
Query: 1 VYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGAGNNWAKGHYTE 180
VYYNEASGGKYVPRAVLVDLEPGTMDSVR+GPFGQ+FRPDNF+FGQSGAGNNWAKGHYTE
Sbjct: 49 VYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE 108
Query: 181 GAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFS 360
GAELVDSVLDVVRKEAE CDCLQGFQ KIREEYPDRIMNTFS
Sbjct: 109 GAELVDSVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFS 168
Query: 361 VVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHL 540
VVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHL
Sbjct: 169 VVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHL 228
Query: 541 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 720
VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF+PGFAPLTSRG QQYR+LTVPE
Sbjct: 229 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGGQQYRSLTVPE 288
Query: 721 LTQQMFDAKNMMAACD 768
LTQQMFD+KNMMAACD
Sbjct: 289 LTQQMFDSKNMMAACD 304
>sp|P41937|TBB4_CAEEL Tubulin beta-4 chain (Beta-4 tubulin)
Length = 444
Score = 471 bits (1211), Expect = e-132
Identities = 231/256 (90%), Positives = 234/256 (91%)
Frame = +1
Query: 1 VYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGAGNNWAKGHYTE 180
VYYNEASGGKYVPRA LVDLEPGTMDSVRAGPFGQLFRPDNF+FGQSGAGNNWAKGHYTE
Sbjct: 49 VYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTE 108
Query: 181 GAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFS 360
GAELVD+VLDVVRKEAESCDCLQGFQ KIREEYPDRIM TFS
Sbjct: 109 GAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFS 168
Query: 361 VVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHL 540
VVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHL
Sbjct: 169 VVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHL 228
Query: 541 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE 720
VS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYR+LTVPE
Sbjct: 229 VSMTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPE 288
Query: 721 LTQQMFDAKNMMAACD 768
LTQQMFDAKNMMAACD
Sbjct: 289 LTQQMFDAKNMMAACD 304
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,227,610
Number of Sequences: 369166
Number of extensions: 1747827
Number of successful extensions: 5229
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4802
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7163732800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)