Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_013_I08
(789 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9H4G4|GAPR1_HUMAN Golgi-associated plant pathogenesis-r... 108 2e-23
sp|Q9CYL5|GAPR1_MOUSE Golgi-associated plant pathogenesis-r... 105 1e-22
sp|P47032|PRY1_YEAST PRY1 protein precursor (Pathogen relat... 77 5e-14
sp|P47033|PRY3_YEAST PRY3 protein (Pathogen related in Sc 3) 69 2e-11
sp|P36110|PRY2_YEAST PRY2 protein precursor (Pathogen relat... 65 3e-10
sp|Q8AVA3|CRVP_PSEPO Pseudecin precursor 58 3e-08
sp|P12020|CRIS1_RAT Cysteine-rich secretory protein 1 precu... 56 1e-07
sp|P11670|PRB1_TOBAC Basic form of pathogenesis-related pro... 55 2e-07
sp|P16563|CRIS2_MOUSE Cysteine-rich secretory protein 2 pre... 55 2e-07
sp|Q8JI38|CRVP_LATSE Latisemin precursor 55 2e-07
>sp|Q9H4G4|GAPR1_HUMAN Golgi-associated plant pathogenesis-related protein 1
(Golgi-associated PR-1 protein) (GAPR-1) (Glioma
pathogenesis-related protein 2) (GliPR 2)
Length = 154
Score = 108 bits (270), Expect = 2e-23
Identities = 60/151 (39%), Positives = 95/151 (62%), Gaps = 5/151 (3%)
Frame = +1
Query: 10 QEFIDECLREHNKYRRLHGVQPLRHSIHLDKTAQEWAEDLVMKETLQNSPVSSKGEVGEN 189
++F +E L+ HN+YR+ HGV PL+ +L++ AQ+++E L L++SP SS+G+ GEN
Sbjct: 7 KQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGEN 66
Query: 190 ISMRKSSSANVSLSGTDVSKQWYDDNKNYDFVKG--SGPAGNFTQMVWMSTEEVGFGIAH 363
++ A+ +G +V+ +WY + KNY+F + + G+FT MVW +T+++G G A
Sbjct: 67 LAW-----ASYDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKAS 121
Query: 364 -SKGRCIVVGHYKPPGNV--KGNYLENVFPP 447
S G VV Y P GNV +G + ENV PP
Sbjct: 122 ASDGSSFVVARYFPAGNVVNEGFFEENVLPP 152
Score = 31.6 bits (70), Expect = 2.6
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 655 KRKLRSFVRDTIGAINRYRMKHGVLKLKHNAALDKLAQDWAEEL 786
K + F + + A N YR KHGV LK L++ AQ ++E L
Sbjct: 3 KSASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEAL 46
>sp|Q9CYL5|GAPR1_MOUSE Golgi-associated plant pathogenesis-related protein 1
(Golgi-associated PR-1 protein) (GAPR-1) (Glioma
pathogenesis-related protein 2) (GliPR 2)
Length = 154
Score = 105 bits (262), Expect = 1e-22
Identities = 59/151 (39%), Positives = 93/151 (61%), Gaps = 5/151 (3%)
Frame = +1
Query: 10 QEFIDECLREHNKYRRLHGVQPLRHSIHLDKTAQEWAEDLVMKETLQNSPVSSKGEVGEN 189
++F +E L+ HN+YR HGV PL+ L++ AQ+++E L L++SP SS+G+ GEN
Sbjct: 7 KQFNNEVLKAHNEYRAQHGVPPLKLCKKLNREAQQYSEALASTRILKHSPESSRGQCGEN 66
Query: 190 ISMRKSSSANVSLSGTDVSKQWYDDNKNYDFVKG--SGPAGNFTQMVWMSTEEVGFGIAH 363
++ A+ +G DV+ +WY + K+Y+F + + G+FT MVW +T+++G G A
Sbjct: 67 LAW-----ASYDQTGKDVADRWYSEIKSYNFQQPGFTSGTGHFTAMVWKNTKKIGVGKAS 121
Query: 364 -SKGRCIVVGHYKPPGNV--KGNYLENVFPP 447
S G VV Y P GN+ +G + ENV PP
Sbjct: 122 ASDGSSFVVARYFPAGNIVNQGFFEENVPPP 152
Score = 30.0 bits (66), Expect = 7.5
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 655 KRKLRSFVRDTIGAINRYRMKHGVLKLKHNAALDKLAQDWAEEL 786
K + F + + A N YR +HGV LK L++ AQ ++E L
Sbjct: 3 KSASKQFNNEVLKAHNEYRAQHGVPPLKLCKKLNREAQQYSEAL 46
>sp|P47032|PRY1_YEAST PRY1 protein precursor (Pathogen related in Sc 1)
Length = 299
Score = 77.0 bits (188), Expect = 5e-14
Identities = 55/152 (36%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Frame = +1
Query: 4 EIQEFIDECLREHNKYRRLHGVQP-LRHSIHLDKTAQEWAEDLVMKETLQNSPVSSKGEV 180
++ +F L EHNK R LH P L S L AQ++A++ TL +S G
Sbjct: 158 DLSDFASSVLAEHNKKRALHKDTPALSWSDTLASYAQDYADNYDCSGTLTHSG----GPY 213
Query: 181 GENISMRKSSSANVSLSGTDVSKQWYDDNKNYDFVKG--SGPAGNFTQMVWMSTEEVGFG 354
GEN+++ A V WY++ NYDF S G+FTQ+VW ST +VG G
Sbjct: 214 GENLALGYDGPAAVDA--------WYNEISNYDFSNPGFSSNTGHFTQVVWKSTTQVGCG 265
Query: 355 IAHSKGRC--IVVGHYKPPGNVKGNYLENVFP 444
I G V+ Y P GN +G Y +NV P
Sbjct: 266 IKTCGGAWGDYVICSYDPAGNYEGEYADNVEP 297
>sp|P47033|PRY3_YEAST PRY3 protein (Pathogen related in Sc 3)
Length = 881
Score = 68.6 bits (166), Expect = 2e-11
Identities = 51/154 (33%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Frame = +1
Query: 16 FIDECLREHNKYRRLH-GVQPLRHSIHLDKTAQEWAEDLVMKETLQNSPVSSKGEVGENI 192
F + L EHNK+R LH PL S L AQ +A+ L +S G GEN+
Sbjct: 25 FESDVLNEHNKFRALHVDTAPLTWSDTLATYAQNYADQYDCSGVLTHSD----GPYGENL 80
Query: 193 SMRKSSSANVSLSGTDVSKQWYDDNKNYDFVKGSGPAGNFTQMVWMSTEEVGFGIAH--S 366
++ + + V ++SK NY S G+FTQ+VW ST E+G G + +
Sbjct: 81 ALGYTDTGAVDAWYGEISKY------NYSNPGFSESTGHFTQVVWKSTAEIGCGYKYCGT 134
Query: 367 KGRCIVVGHYKPPGNVKGNYLENVFPPTSSQSAN 468
+V Y PPGN G + E V P S+ S++
Sbjct: 135 TWNNYIVCSYNPPGNYLGEFAEEVEPLISTVSSS 168
>sp|P36110|PRY2_YEAST PRY2 protein precursor (Pathogen related in Sc 2)
Length = 329
Score = 64.7 bits (156), Expect = 3e-10
Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 5/149 (3%)
Frame = +1
Query: 13 EFIDECLREHNKYRRLH-GVQPLRHSIHLDKTAQEWAEDLVMKETLQNSPVSSKGEVGEN 189
+F + EHN R LH L S L AQ +A+ L V S G GEN
Sbjct: 191 DFSTSMVNEHNTKRALHKDTGSLTWSDTLATYAQNYADSYDCSGNL----VHSGGPYGEN 246
Query: 190 ISMRKSSSANVSLSGTDVSKQWYDDNKNYDFVKG--SGPAGNFTQMVWMSTEEVGFGIAH 363
+++ ++ +V WY++ +YD+ S AG+FTQ+VW T EVG G+
Sbjct: 247 LALGYGTTGSVDA--------WYNEITSYDYSNPGFSESAGHFTQVVWKGTSEVGCGLKS 298
Query: 364 SKGRC--IVVGHYKPPGNVKGNYLENVFP 444
G ++ YK GNV G + +NV P
Sbjct: 299 CGGEWGDYIICSYKAAGNVIGEFADNVMP 327
>sp|Q8AVA3|CRVP_PSEPO Pseudecin precursor
Length = 238
Score = 57.8 bits (138), Expect = 3e-08
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Frame = +1
Query: 25 ECLREHNKYRRLHGVQP-------LRHSIHLDKTAQEWAEDLVMKETLQNSPVSSKGEVG 183
E + +HN RR V+P ++ + H + A+ WA+ + N+ K G
Sbjct: 36 EIVDKHNALRR--SVKPTARNMLQMKWNSHAAQNAKRWADRCTFAHSPPNTRTVGKLRCG 93
Query: 184 ENISMRKSSSANVSLSGTDVSKQWYDDNKNYDFVKGSGP----AGNFTQMVWMSTEEVGF 351
ENI M SS SG V + WYD+ KN+ + G+ P G++TQ+VW + +G
Sbjct: 94 ENIFM---SSQPFPWSG--VVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGC 148
Query: 352 GIAH-SKGRCIVVGHYKPPGNVKGN 423
A S + + V Y P GN++G+
Sbjct: 149 ASAKCSSSKYLYVCQYCPAGNIRGS 173
>sp|P12020|CRIS1_RAT Cysteine-rich secretory protein 1 precursor (Sperm-coating
glycoprotein) (SCP) (Acidic epididymal glycoprotein)
(Protein D) (Protein E) (Protein IV) (Sialoprotein) (32
kDa epididymal protein)
Length = 246
Score = 55.8 bits (133), Expect = 1e-07
Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Frame = +1
Query: 22 DECLREHNKYRRL---HGVQPLR----HSIHLDKTAQEWAEDLVMKET-LQNSPVSSKGE 177
+E + +HN+ RR G LR H +++ AQ+WA + + LQ+ + K
Sbjct: 42 EEIINKHNQLRRTVSPSGSDLLRVEWDHDAYVN--AQKWANRCIYNHSPLQHRTTTLK-- 97
Query: 178 VGENISMRKSSSANVSLSGTDVSKQWYDDNKNYDFVKGSGP------AGNFTQMVWMSTE 339
GEN+ M AN S + V + WYD++ DFV G GP G++TQ+VW ST
Sbjct: 98 CGENLFM-----ANYPASWSSVIQDWYDES--LDFVFGFGPKKVGVKVGHYTQVVWNSTF 150
Query: 340 EVGFGIAHSKG---RCIVVGHYKPPGNVKG 420
V G+A + V HY P GN G
Sbjct: 151 LVACGVAECPDQPLKYFYVCHYCPGGNYVG 180
>sp|P11670|PRB1_TOBAC Basic form of pathogenesis-related protein 1 precursor (PRP 1)
Length = 177
Score = 55.5 bits (132), Expect = 2e-07
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Frame = +1
Query: 31 LREHNKYRRLHGVQPLRHSIHLDKTAQEWAEDLVMKETLQNSPVSSKGEVGENISMRKSS 210
L HN RR GV P+ L AQ +A + + + S G GEN++
Sbjct: 31 LNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGM----IHSHGPYGENLA----- 81
Query: 211 SANVSLSGTDVSKQWYDDNKNYDFVKGS---GPAGNFTQMVWMSTEEVGFG-IAHSKGRC 378
+A L+ K W D+ + YD+ S G G++TQ+VW ++ +G + + G
Sbjct: 82 AAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNSVRLGCARVRSNNGWF 141
Query: 379 IVVGHYKPPGNVKG 420
+ +Y PPGN G
Sbjct: 142 FITCNYDPPGNFIG 155
>sp|P16563|CRIS2_MOUSE Cysteine-rich secretory protein 2 precursor (CRISP-2)
(Testis-specific protein TPX-1)
Length = 243
Score = 55.1 bits (131), Expect = 2e-07
Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 12/141 (8%)
Frame = +1
Query: 25 ECLREHNKYRRL-----HGVQPLRHSIHLDKTAQEWAEDLVMKETLQNSPVSSKGEVGEN 189
E + +HN+ RR + + SI AQ+WA +++ + ++ + GEN
Sbjct: 40 EIVNKHNELRRSVNPTGSDILKMEWSIQATTNAQKWANKCILEHSSKDDRKINI-RCGEN 98
Query: 190 ISMRKSSSANVSLSGTDVSKQWYDDNKNYDFVKGSGP---AGNFTQMVWMSTEEVGFGIA 360
+ M S + +L T V + WY++N+++ + G+ P G++TQ+VW S+ ++G GIA
Sbjct: 99 LYM----STDPTLWST-VIQSWYNENEDFVYGVGAKPNSAVGHYTQLVWYSSFKIGCGIA 153
Query: 361 HSKG----RCIVVGHYKPPGN 411
+ + V HY P GN
Sbjct: 154 YCPNQDNLKYFYVCHYCPMGN 174
>sp|Q8JI38|CRVP_LATSE Latisemin precursor
Length = 238
Score = 55.1 bits (131), Expect = 2e-07
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 12/184 (6%)
Frame = +1
Query: 25 ECLREHNKYRRLHGVQPL-RHSIHLD------KTAQEWAEDLVMKETLQNSPVSSKGEVG 183
E + +HN RR V+P R+ + ++ + AQ WA+ + + K G
Sbjct: 36 EIVDKHNALRR--SVRPTARNMLQMEWNSDAAQNAQRWADRCSFAHSPSHLRTVGKFSCG 93
Query: 184 ENISMRKSSSANVSLSGTDVSKQWYDDNKNYDFVKGSGP----AGNFTQMVWMSTEEVGF 351
EN+ M A + V + WYD+NKN+ + G+ P G++TQ+VW + +G
Sbjct: 94 ENLFMSSQPYA-----WSRVIQSWYDENKNFIYDVGANPPGSVIGHYTQIVWYKSHLLGC 148
Query: 352 GIAH-SKGRCIVVGHYKPPGNVKGNYLENVFPPTSSQSANMPIQETKIPIQCSLPTKKEH 528
A S + + V Y P GN+ G ++ P S + C+ P K E+
Sbjct: 149 AAARCSSSKYLYVCQYCPAGNIIG----SIATPYKSGPPCGDCPSACVNGLCTNPCKHEN 204
Query: 529 QSDN 540
+ N
Sbjct: 205 EFTN 208
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.314 0.131 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,917,016
Number of Sequences: 369166
Number of extensions: 2035269
Number of successful extensions: 4066
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4029
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7454154400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)