Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_D17
(863 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 523 e-148
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 522 e-148
sp|P06605|TBA3_DROME Tubulin alpha-3 chain 519 e-147
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 519 e-147
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 518 e-147
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 518 e-147
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 518 e-146
sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6) 516 e-146
sp|P08537|TBA_XENLA Tubulin alpha chain 516 e-146
sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6) 516 e-146
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 523 bits (1346), Expect = e-148
Identities = 254/275 (92%), Positives = 261/275 (94%)
Frame = +1
Query: 37 G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
G AGVQMGNACWELYCLEHGIQPDGQMPSDK+IGGGDDSFNTFFSETG GKHVPRAVF+D
Sbjct: 10 GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEI+D+VLDRIRKLADQC
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQC 129
Query: 397 SGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 576
+GLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQI+TAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSIL 189
Query: 577 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 756
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 757 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 861
VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 522 bits (1344), Expect = e-148
Identities = 254/275 (92%), Positives = 261/275 (94%)
Frame = +1
Query: 37 G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
G AGVQMGNACWELYCLEHGIQPDGQMPSDK+IGGGDDSFNTFFSETG GKHVPRAVF+D
Sbjct: 10 GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE++D+VLDRIRKLADQC
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLDRIRKLADQC 129
Query: 397 SGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 576
+GLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQI+TAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSIL 189
Query: 577 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 756
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 757 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 861
VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
Length = 450
Score = 519 bits (1337), Expect = e-147
Identities = 251/275 (91%), Positives = 260/275 (94%)
Frame = +1
Query: 37 G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
G AGVQ+GNACWELYCLEHGIQPDGQMPSDK++GGGDDSFNTFFSETG GKHVPRAVF+D
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEIVD+VLDRIRKLADQC
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 129
Query: 397 SGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 576
+GLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQ++TAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSIL 189
Query: 577 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 756
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 757 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 861
VDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHE
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHE 284
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 519 bits (1336), Expect = e-147
Identities = 250/275 (90%), Positives = 260/275 (94%)
Frame = +1
Query: 37 G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
G AGVQ+GNACWELYCLEHGIQPDGQMPSDK++GGGDDSFNTFFSETG GKHVPRAVF+D
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEIVD+VLDRIRKLADQC
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 129
Query: 397 SGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 576
+GLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 189
Query: 577 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 756
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 757 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 861
VDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHE
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHE 284
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 518 bits (1335), Expect = e-147
Identities = 248/275 (90%), Positives = 261/275 (94%)
Frame = +1
Query: 37 G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
G AGVQ+GNACWELYCLEHGIQPDGQMPSDK+IGGGDDSFNTFFSETG GKHVPRAVF+D
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
LEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+D+VLDRIRKLADQC
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQC 129
Query: 397 SGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 576
+GLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSIL
Sbjct: 130 TGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSIL 189
Query: 577 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 756
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 757 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 861
VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 518 bits (1334), Expect = e-147
Identities = 251/275 (91%), Positives = 260/275 (94%)
Frame = +1
Query: 37 G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
G AGVQ+GNACWELYCLEHGIQPDGQMPSDK+IGGGDDSFNTFFSETG GKHVPRAVF+D
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEIVD+VLDRIRKLAD C
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLC 129
Query: 397 SGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 576
+GLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 189
Query: 577 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 756
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 757 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 861
VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 518 bits (1333), Expect = e-146
Identities = 249/275 (90%), Positives = 260/275 (94%)
Frame = +1
Query: 37 G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
G AGVQ+GNACWELYCLEHGIQPDGQMPSDK+IGGGDDSFNTFFSETG GKHVPRAVF+D
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEIVD+VLDR+RKL+DQC
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRKLSDQC 129
Query: 397 SGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 576
+GLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 189
Query: 577 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 756
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 757 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 861
VDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHE
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHE 284
>sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6)
Length = 451
Score = 516 bits (1329), Expect = e-146
Identities = 247/275 (89%), Positives = 260/275 (94%)
Frame = +1
Query: 37 G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
G AGVQ+GNACWELYCLEHGIQPDGQMPSDK+IGGGDDSFNTFFSETG GKHVPRAVF+D
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
LEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+D+VLDRIRKLADQC
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQC 129
Query: 397 SGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 576
+GLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSIL
Sbjct: 130 TGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSIL 189
Query: 577 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 756
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALN 249
Query: 757 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 861
VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284
>sp|P08537|TBA_XENLA Tubulin alpha chain
Length = 449
Score = 516 bits (1329), Expect = e-146
Identities = 247/275 (89%), Positives = 260/275 (94%)
Frame = +1
Query: 37 G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
G AGVQ+GNACWELYCLEHGIQPDGQMPSDK+IGGGDDSFNTFFSETG GKHVPRAVF+D
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
LEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+D+VLDRIRKLADQC
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQC 129
Query: 397 SGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 576
+GLQGFL+FH LL+ERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSIL
Sbjct: 130 TGLQGFLVFHSFGGGTGSGFTSLLLERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 189
Query: 577 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 756
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALN 249
Query: 757 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 861
VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284
>sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6)
Length = 449
Score = 516 bits (1329), Expect = e-146
Identities = 247/275 (89%), Positives = 260/275 (94%)
Frame = +1
Query: 37 G*AGVQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDDSFNTFFSETGTGKHVPRAVFID 216
G AGVQ+GNACWELYCLEHGIQPDGQMPSDK+IGGGDDSFNTFFSETG GKHVPRAVF+D
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 217 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDMVLDRIRKLADQC 396
LEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+D+VLDRIRKLADQC
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQC 129
Query: 397 SGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 576
+GLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSIL
Sbjct: 130 TGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSIL 189
Query: 577 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 756
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALN 249
Query: 757 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 861
VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,871,888
Number of Sequences: 369166
Number of extensions: 2361244
Number of successful extensions: 6981
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6669
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8582957970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)