Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_O22
(545 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P91800|TCTP_SCHJA Translationally-controlled tumor prote... 167 2e-41
sp|Q10344|TCTP_SCHPO Translationally-controlled tumor prote... 165 8e-41
sp|Q95VY2|TCTP_BRABE Translationally-controlled tumor prote... 149 4e-36
sp|Q98SJ7|TCTP_LABRO Translationally-controlled tumor prote... 147 2e-35
sp|Q9DGK4|TCTP_BRARE Translationally-controlled tumor prote... 145 5e-35
sp|Q9VGS2|TCTP_DROME Translationally-controlled tumor prote... 142 5e-34
sp|P13693|TCTP_HUMAN Translationally-controlled tumor prote... 138 1e-32
sp|Q5E984|TCTP_BOVIN Translationally-controlled tumor prote... 137 1e-32
sp|Q6XSH4|TCTP_LATJA Translationally-controlled tumor prote... 137 2e-32
sp|P35691|TCTP_YEAST Translationally-controlled tumor prote... 136 3e-32
>sp|P91800|TCTP_SCHJA Translationally-controlled tumor protein homolog (TCTP)
Length = 169
Score = 167 bits (422), Expect = 2e-41
Identities = 76/161 (47%), Positives = 112/161 (69%)
Frame = +1
Query: 1 ISGDEIGSDSYPMKLVDDIVYEFDGKNITIKNGIPEDKIGGNKSADVDDEEYSDTTETQI 180
ISGDE+ SDS+ +L++D+VYE D IT+ NG+ I N S + EE SD+TE I
Sbjct: 8 ISGDEMFSDSHSPQLINDVVYEVDANFITVSNGLDSKLIAANPSGEEGQEEVSDSTERVI 67
Query: 181 DIVYANRLVEISYGKKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILKNFK 360
D+V+A+RLV S+ KK Y Y+K Y+K I + L+ +NP+RV++F++ +Y+ + KNF
Sbjct: 68 DLVHASRLVSTSFDKKSYRAYLKGYLKAIKERLQKENPERVSIFESRINEYMVNVFKNFD 127
Query: 361 EYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEK 483
+Y+ Y GE+MNP+ MV L N+RE+ +TPYF+ KDG+ EEK
Sbjct: 128 DYEHYIGESMNPDGMVALMNFRENGVTPYFVFLKDGLIEEK 168
>sp|Q10344|TCTP_SCHPO Translationally-controlled tumor protein homolog (TCTP) (p23fyp)
Length = 168
Score = 165 bits (417), Expect = 8e-41
Identities = 87/161 (54%), Positives = 112/161 (69%)
Frame = +1
Query: 1 ISGDEIGSDSYPMKLVDDIVYEFDGKNITIKNGIPEDKIGGNKSADVDDEEYSDTTETQI 180
ISGDE+ SD+Y +K VDDIVYE D + +T+K G D IG N SA+ +E + TET
Sbjct: 8 ISGDELVSDAYDLKEVDDIVYEADCQMVTVKQGGDVD-IGANPSAEDAEENAEEGTETVN 66
Query: 181 DIVYANRLVEISYGKKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILKNFK 360
++VY+ RL S+ KK Y +YIK YMK I L+ NP+RV VF+ NA +V +IL NFK
Sbjct: 67 NLVYSFRLSPTSFDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANFK 126
Query: 361 EYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEK 483
+Y FY GE+M+P+AMV+L NYRED ITPY I FKDG+ EK
Sbjct: 127 DYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGLVSEK 167
>sp|Q95VY2|TCTP_BRABE Translationally-controlled tumor protein (TCTP)
Length = 169
Score = 149 bits (376), Expect = 4e-36
Identities = 74/161 (45%), Positives = 104/161 (64%)
Frame = +1
Query: 1 ISGDEIGSDSYPMKLVDDIVYEFDGKNITIKNGIPEDKIGGNKSADVDDEEYSDTTETQI 180
+SGDE+ SD+Y MK++DD YE +GK T K GI E IGGN SA+ E ++ T
Sbjct: 8 VSGDEMFSDAYKMKVLDDYFYELEGKITTEKGGIDESAIGGNASAEDAVEGLEESGTTGC 67
Query: 181 DIVYANRLVEISYGKKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILKNFK 360
+IV A RL E + K +Y YIK+Y K++L+ L P+RV+ FK + + ++ NFK
Sbjct: 68 NIVIAQRLQETQFTKAQYKVYIKDYSKKVLEYLTKNKPERVDGFKAASAAGMKRVMGNFK 127
Query: 361 EYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEK 483
++F+TGE M+ + MV L +YRED TPY + FKDG+EEEK
Sbjct: 128 NWQFFTGEKMDQDGMVALMDYREDGKTPYMLFFKDGLEEEK 168
>sp|Q98SJ7|TCTP_LABRO Translationally-controlled tumor protein (TCTP)
Length = 171
Score = 147 bits (370), Expect = 2e-35
Identities = 78/164 (47%), Positives = 109/164 (66%), Gaps = 2/164 (1%)
Frame = +1
Query: 1 ISGDEIGSDSYPMKLVDD-IVYEFDGKNITIKNGIPEDK-IGGNKSADVDDEEYSDTTET 174
I+GDE+ SD Y +K ++ ++ E +GK I+ G +D IGGN SA+V DE TT +
Sbjct: 8 ITGDEMFSDIYKIKESENGMMIEVEGKMISRAEGEIDDALIGGNASAEVQDEGCESTTVS 67
Query: 175 QIDIVYANRLVEISYGKKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILKN 354
+DIV ++L E SY KK YT YIK+YMK + L+ PDRV+ F NA V +IL N
Sbjct: 68 GVDIVLNHKLQETSYDKKSYTAYIKDYMKAVKAKLQEVAPDRVDPFMANAPAEVKKILGN 127
Query: 355 FKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEKC 486
K ++F+TGE+MNP+ M+ L ++RED +TPY + FKDG+E EKC
Sbjct: 128 IKNFQFFTGESMNPDGMIGLLDFREDGVTPYMLFFKDGLEIEKC 171
>sp|Q9DGK4|TCTP_BRARE Translationally-controlled tumor protein (TCTP)
Length = 171
Score = 145 bits (367), Expect = 5e-35
Identities = 78/164 (47%), Positives = 109/164 (66%), Gaps = 2/164 (1%)
Frame = +1
Query: 1 ISGDEIGSDSYPMKLVDD-IVYEFDGKNITIKNGIPEDK-IGGNKSADVDDEEYSDTTET 174
I+GDE+ SD Y +K ++ ++ E +GK IT G +D IGGN SA+V DE T+ +
Sbjct: 8 ITGDEMFSDIYKIKESENGMMLEVEGKMITRAEGDIDDALIGGNASAEVADEGCDSTSVS 67
Query: 175 QIDIVYANRLVEISYGKKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILKN 354
+DIV ++L E SY KK YT YIK+YMK + L+ P+RV+ F NA V +IL N
Sbjct: 68 GVDIVLNHKLQETSYDKKSYTAYIKDYMKAVKAKLQESAPNRVDPFMANAPAEVKKILGN 127
Query: 355 FKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEKC 486
K ++F+TGE+MNP+ M+ L ++RED +TPY I FKDG+E EKC
Sbjct: 128 IKNFQFFTGESMNPDGMIGLLDFREDGVTPYMIFFKDGLEIEKC 171
>sp|Q9VGS2|TCTP_DROME Translationally-controlled tumor protein homolog (TCTP)
Length = 172
Score = 142 bits (358), Expect = 5e-34
Identities = 78/166 (46%), Positives = 111/166 (66%), Gaps = 4/166 (2%)
Frame = +1
Query: 1 ISGDEIGSDSYPMKLVDDIVYEFDGKNITIKNGIPEDKIGGNKSADVDDEEYSDTTETQI 180
I+GDE+ +D+Y MKLVDD++YE GK IT + G G N SA+ DE T+E+ +
Sbjct: 8 ITGDEMFADTYKMKLVDDVIYEVYGKLIT-RQGDDIKLEGANASAEEADEGTDITSESGV 66
Query: 181 DIVYANRLVE-ISYG-KKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILKN 354
D+V +RL E ++G KK YT Y+K+YMK++L L+ K+PD+V++FKTN K + +IL
Sbjct: 67 DVVLNHRLTECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDIFKTNMNKAMKDILGR 126
Query: 355 FKEYKFYTGETMNPEAMVILCNYRE--DQITPYFIVFKDGIEEEKC 486
FKE +F+TGE+M+ + MV L YRE P + FK G+EEEKC
Sbjct: 127 FKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLEEEKC 172
>sp|P13693|TCTP_HUMAN Translationally-controlled tumor protein (TCTP) (p23)
(Histamine-releasing factor) (HRF) (Fortilin)
sp|P61288|TCTP_PIG Translationally-controlled tumor protein (TCTP)
Length = 172
Score = 138 bits (347), Expect = 1e-32
Identities = 75/165 (45%), Positives = 105/165 (63%), Gaps = 3/165 (1%)
Frame = +1
Query: 1 ISGDEIGSDSYPMK-LVDDIVYEFDGKNITIKNG-IPEDKIGGNKSADVDDEEYSDTTE- 171
IS DE+ SD Y ++ + D + E +GK ++ G I + IGGN SA+ + E +++T
Sbjct: 8 ISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVI 67
Query: 172 TQIDIVYANRLVEISYGKKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILK 351
T +DIV + L E S+ K+ Y YIK+YMK I L+ + P+RV F T A + + IL
Sbjct: 68 TGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILA 127
Query: 352 NFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEKC 486
NFK Y+F+ GE MNP+ MV L +YRED +TPY I FKDG+E EKC
Sbjct: 128 NFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172
>sp|Q5E984|TCTP_BOVIN Translationally-controlled tumor protein (TCTP)
Length = 172
Score = 137 bits (346), Expect = 1e-32
Identities = 76/165 (46%), Positives = 105/165 (63%), Gaps = 3/165 (1%)
Frame = +1
Query: 1 ISGDEIGSDSYPMKLV-DDIVYEFDGKNITIKNG-IPEDKIGGNKSADVDDEEYSDTTE- 171
IS DE+ SD Y ++ V D + E +GK ++ G I + IGGN SA+ + E +++T
Sbjct: 8 ISHDEMFSDIYKIREVADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVI 67
Query: 172 TQIDIVYANRLVEISYGKKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILK 351
T +DIV + L E S+ K+ Y YIK+YMK I L+ + P+RV F T A + + IL
Sbjct: 68 TGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILA 127
Query: 352 NFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEKC 486
NFK Y+F+ GE MNP+ MV L +YRED +TPY I FKDG+E EKC
Sbjct: 128 NFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172
>sp|Q6XSH4|TCTP_LATJA Translationally-controlled tumor protein (TCTP)
Length = 170
Score = 137 bits (344), Expect = 2e-32
Identities = 72/163 (44%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Frame = +1
Query: 1 ISGDEIGSDSYPMK-LVDDIVYEFDGKNITIKNGIPEDKIGGNKSADVDDEEYSDTTETQ 177
ISGDE+ SD++ +K + I YE DGK T + I + I N SA+ + + +
Sbjct: 8 ISGDEMFSDAFKVKESANGIFYEVDGKITTRTDNIDDSLISANASAEETTDCTDSSVVSG 67
Query: 178 IDIVYANRLVEISYGKKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILKNF 357
+DIV ++L E S+ KK Y YIK+Y+K I L+ + P+RV+ F + + V EIL N
Sbjct: 68 VDIVLNHKLQETSFDKKSYKVYIKDYVKAIKQKLQEEKPERVDAFMADVAEEVKEILNNL 127
Query: 358 KEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEKC 486
K Y+F+TGE MNPE MV L +YRED TPY + FKDG+ EKC
Sbjct: 128 KNYQFFTGENMNPEGMVGLLDYREDGTTPYMLFFKDGLLAEKC 170
>sp|P35691|TCTP_YEAST Translationally-controlled tumor protein homolog (TCTP)
Length = 167
Score = 136 bits (343), Expect = 3e-32
Identities = 67/160 (41%), Positives = 105/160 (65%)
Frame = +1
Query: 4 SGDEIGSDSYPMKLVDDIVYEFDGKNITIKNGIPEDKIGGNKSADVDDEEYSDTTETQID 183
S DE+ SD+Y KLVDD++YE D + + G IG N SA+ D++ + E +
Sbjct: 9 SNDELLSDAYDAKLVDDVIYEADCAMVNV--GGDNIDIGANPSAEGGDDDVEEGAEMVNN 66
Query: 184 IVYANRLVEISYGKKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILKNFKE 363
+V++ RL + ++ KK + TYIK YMK + L+ NP+ V F+ AQ YV +++ +FK+
Sbjct: 67 VVHSFRLQQTAFDKKSFLTYIKGYMKAVKAKLQETNPEEVPKFEKGAQTYVKKVIGSFKD 126
Query: 364 YKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEK 483
++F+TGE+M+P+AMV++ NYRED TP+ ++K GI EEK
Sbjct: 127 WEFFTGESMDPDAMVVMLNYREDGTTPFVAIWKHGIVEEK 166
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,929,202
Number of Sequences: 369166
Number of extensions: 1355587
Number of successful extensions: 4208
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4164
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 3783975580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)