Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_008_O24
(824 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 498 e-140
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 496 e-140
sp|P06605|TBA3_DROME Tubulin alpha-3 chain 496 e-140
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 496 e-140
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 495 e-140
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 494 e-139
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 494 e-139
sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6) 492 e-139
sp|P08537|TBA_XENLA Tubulin alpha chain 492 e-139
sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6) 492 e-139
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 498 bits (1281), Expect = e-140
Identities = 242/258 (93%), Positives = 246/258 (95%)
Frame = +3
Query: 3 AGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 182
AGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE
Sbjct: 12 AGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 71
Query: 183 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 362
PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLDRIRKLADQCTG
Sbjct: 72 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQCTG 131
Query: 363 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTT 542
LQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQI+TAVVEPYNSILTT
Sbjct: 132 LQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTT 191
Query: 543 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 722
HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD
Sbjct: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 251
Query: 723 LTEFQTNLVPYPRIHFPL 776
LTEFQTNLVPYPRIHFPL
Sbjct: 252 LTEFQTNLVPYPRIHFPL 269
Score = 42.0 bits (97), Expect = 0.002
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 767 FPIATYAPVISAEKAYHEQ 823
FP+ATYAPVISAEKAYHEQ
Sbjct: 267 FPLATYAPVISAEKAYHEQ 285
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 496 bits (1278), Expect = e-140
Identities = 241/258 (93%), Positives = 246/258 (95%)
Frame = +3
Query: 3 AGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 182
AGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE
Sbjct: 12 AGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 71
Query: 183 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 362
PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+VLDRIRKLADQCTG
Sbjct: 72 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLDRIRKLADQCTG 131
Query: 363 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTT 542
LQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQI+TAVVEPYNSILTT
Sbjct: 132 LQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTT 191
Query: 543 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 722
HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD
Sbjct: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 251
Query: 723 LTEFQTNLVPYPRIHFPL 776
LTEFQTNLVPYPRIHFPL
Sbjct: 252 LTEFQTNLVPYPRIHFPL 269
Score = 42.0 bits (97), Expect = 0.002
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 767 FPIATYAPVISAEKAYHEQ 823
FP+ATYAPVISAEKAYHEQ
Sbjct: 267 FPLATYAPVISAEKAYHEQ 285
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
Length = 450
Score = 496 bits (1278), Expect = e-140
Identities = 242/258 (93%), Positives = 246/258 (95%)
Frame = +3
Query: 3 AGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 182
AGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGKHVPRAVFVDLE
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVDLE 71
Query: 183 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 362
PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG
Sbjct: 72 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 131
Query: 363 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTT 542
LQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQ++TAVVEPYNSILTT
Sbjct: 132 LQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTT 191
Query: 543 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 722
HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD
Sbjct: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 251
Query: 723 LTEFQTNLVPYPRIHFPL 776
LTEFQTNLVPYPRIHFPL
Sbjct: 252 LTEFQTNLVPYPRIHFPL 269
Score = 40.4 bits (93), Expect = 0.006
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 767 FPIATYAPVISAEKAYHEQ 823
FP+ TYAPVISAEKAYHEQ
Sbjct: 267 FPLVTYAPVISAEKAYHEQ 285
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 496 bits (1277), Expect = e-140
Identities = 241/258 (93%), Positives = 246/258 (95%)
Frame = +3
Query: 3 AGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 182
AGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGKHVPRAVFVDLE
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVDLE 71
Query: 183 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 362
PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG
Sbjct: 72 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 131
Query: 363 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTT 542
LQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTT
Sbjct: 132 LQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 191
Query: 543 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 722
HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD
Sbjct: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 251
Query: 723 LTEFQTNLVPYPRIHFPL 776
LTEFQTNLVPYPRIHFPL
Sbjct: 252 LTEFQTNLVPYPRIHFPL 269
Score = 40.4 bits (93), Expect = 0.006
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 767 FPIATYAPVISAEKAYHEQ 823
FP+ TYAPVISAEKAYHEQ
Sbjct: 267 FPLVTYAPVISAEKAYHEQ 285
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 495 bits (1274), Expect = e-140
Identities = 240/258 (93%), Positives = 246/258 (95%)
Frame = +3
Query: 3 AGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 182
AGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 71
Query: 183 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 362
PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR+RKL+DQCTG
Sbjct: 72 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRKLSDQCTG 131
Query: 363 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTT 542
LQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTT
Sbjct: 132 LQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 191
Query: 543 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 722
HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD
Sbjct: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 251
Query: 723 LTEFQTNLVPYPRIHFPL 776
LTEFQTNLVPYPRIHFPL
Sbjct: 252 LTEFQTNLVPYPRIHFPL 269
Score = 38.5 bits (88), Expect = 0.023
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2
Query: 767 FPIATYAPVISAEKAYHE 820
FP+ TYAPVISAEKAYHE
Sbjct: 267 FPLVTYAPVISAEKAYHE 284
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 494 bits (1272), Expect = e-139
Identities = 238/258 (92%), Positives = 246/258 (95%)
Frame = +3
Query: 3 AGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 182
AGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 71
Query: 183 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 362
PTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCTG
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTG 131
Query: 363 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTT 542
LQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTT
Sbjct: 132 LQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTT 191
Query: 543 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 722
HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD
Sbjct: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 251
Query: 723 LTEFQTNLVPYPRIHFPL 776
LTEFQTNLVPYPRIHFPL
Sbjct: 252 LTEFQTNLVPYPRIHFPL 269
Score = 42.0 bits (97), Expect = 0.002
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 767 FPIATYAPVISAEKAYHEQ 823
FP+ATYAPVISAEKAYHEQ
Sbjct: 267 FPLATYAPVISAEKAYHEQ 285
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 494 bits (1271), Expect = e-139
Identities = 241/258 (93%), Positives = 245/258 (94%)
Frame = +3
Query: 3 AGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 182
AGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 71
Query: 183 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 362
PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD CTG
Sbjct: 72 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTG 131
Query: 363 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTT 542
LQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTT
Sbjct: 132 LQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 191
Query: 543 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 722
HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD
Sbjct: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 251
Query: 723 LTEFQTNLVPYPRIHFPL 776
LTEFQTNLVPYPRIHFPL
Sbjct: 252 LTEFQTNLVPYPRIHFPL 269
Score = 42.0 bits (97), Expect = 0.002
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 767 FPIATYAPVISAEKAYHEQ 823
FP+ATYAPVISAEKAYHEQ
Sbjct: 267 FPLATYAPVISAEKAYHEQ 285
>sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6)
Length = 451
Score = 492 bits (1266), Expect = e-139
Identities = 237/258 (91%), Positives = 245/258 (94%)
Frame = +3
Query: 3 AGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 182
AGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 71
Query: 183 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 362
PTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCTG
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTG 131
Query: 363 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTT 542
LQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTT
Sbjct: 132 LQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTT 191
Query: 543 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 722
HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNVD
Sbjct: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVD 251
Query: 723 LTEFQTNLVPYPRIHFPL 776
LTEFQTNLVPYPRIHFPL
Sbjct: 252 LTEFQTNLVPYPRIHFPL 269
Score = 42.0 bits (97), Expect = 0.002
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 767 FPIATYAPVISAEKAYHEQ 823
FP+ATYAPVISAEKAYHEQ
Sbjct: 267 FPLATYAPVISAEKAYHEQ 285
>sp|P08537|TBA_XENLA Tubulin alpha chain
Length = 449
Score = 492 bits (1266), Expect = e-139
Identities = 237/258 (91%), Positives = 245/258 (94%)
Frame = +3
Query: 3 AGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 182
AGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 71
Query: 183 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 362
PTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCTG
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTG 131
Query: 363 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTT 542
LQGFL+FH LL+ERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTT
Sbjct: 132 LQGFLVFHSFGGGTGSGFTSLLLERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 191
Query: 543 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 722
HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNVD
Sbjct: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVD 251
Query: 723 LTEFQTNLVPYPRIHFPL 776
LTEFQTNLVPYPRIHFPL
Sbjct: 252 LTEFQTNLVPYPRIHFPL 269
Score = 42.0 bits (97), Expect = 0.002
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 767 FPIATYAPVISAEKAYHEQ 823
FP+ATYAPVISAEKAYHEQ
Sbjct: 267 FPLATYAPVISAEKAYHEQ 285
>sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6)
Length = 449
Score = 492 bits (1266), Expect = e-139
Identities = 237/258 (91%), Positives = 245/258 (94%)
Frame = +3
Query: 3 AGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 182
AGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE
Sbjct: 12 AGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 71
Query: 183 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 362
PTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCTG
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTG 131
Query: 363 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTT 542
LQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTT
Sbjct: 132 LQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTT 191
Query: 543 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 722
HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNVD
Sbjct: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVD 251
Query: 723 LTEFQTNLVPYPRIHFPL 776
LTEFQTNLVPYPRIHFPL
Sbjct: 252 LTEFQTNLVPYPRIHFPL 269
Score = 42.0 bits (97), Expect = 0.002
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 767 FPIATYAPVISAEKAYHEQ 823
FP+ATYAPVISAEKAYHEQ
Sbjct: 267 FPLATYAPVISAEKAYHEQ 285
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,146,366
Number of Sequences: 369166
Number of extensions: 1940919
Number of successful extensions: 5876
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5559
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7956112725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)