Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_003_L22
(530 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P35749|MYH11_HUMAN Myosin-11 (Myosin heavy chain, smooth... 69 9e-12
sp|Q61879|MYH10_MOUSE Myosin-10 (Myosin heavy chain, nonmus... 67 2e-11
sp|P35580|MYH10_HUMAN Myosin-10 (Myosin heavy chain, nonmus... 67 2e-11
sp|Q9JLT0|MYH10_RAT Myosin-10 (Myosin heavy chain, nonmuscl... 67 2e-11
sp|Q27991|MYH10_BOVIN Myosin-10 (Myosin heavy chain, nonmus... 67 2e-11
sp|Q99105|MYSU_RABIT Myosin heavy chain, embryonic smooth m... 67 2e-11
sp|O08638|MYH11_MOUSE Myosin-11 (Myosin heavy chain, smooth... 67 4e-11
sp|Q99323|MYSN_DROME Myosin heavy chain, non-muscle (Zipper... 67 4e-11
sp|P35748|MYH11_RABIT Myosin-11 (Myosin heavy chain, smooth... 66 5e-11
sp|Q8VDD5|MYH9_MOUSE Myosin-9 (Myosin heavy chain, nonmuscl... 65 8e-11
>sp|P35749|MYH11_HUMAN Myosin-11 (Myosin heavy chain, smooth muscle isoform) (SMMHC)
Length = 1972
Score = 68.6 bits (166), Expect = 9e-12
Identities = 32/86 (37%), Positives = 54/86 (62%)
Frame = +1
Query: 10 KKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQ 189
K+ ++KLKEI+ + DE++ A+ EQ EK R K+ +R L+ +E + + R+LQ
Sbjct: 1845 KQKDKKLKEILLQVEDERKMAEQYKEQAEKGNARVKQLKRQLEEAEEESQRINANRRKLQ 1904
Query: 190 RDLEEVNETKEARDQEIKVLKTKVER 267
R+L+E E+ EA +E+ LK+K+ R
Sbjct: 1905 RELDEATESNEAMGREVNALKSKLRR 1930
Score = 36.2 bits (82), Expect = 0.051
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 14/102 (13%)
Frame = +1
Query: 13 KLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQR 192
K E +L+ +A + DE + +NA+++I + G + L E+ + Q R L
Sbjct: 1087 KKEEELQAALARLDDEIAQKNNALKKIRELEGHISDLQEDLDSERAARNKAEKQKRDLGE 1146
Query: 193 DLEEVN--------------ETKEARDQEIKVLKTKVERLER 276
+LE + E + R+QE+ VLK ++ R
Sbjct: 1147 ELEALKTELEDTLDSTATQQELRAKREQEVTVLKKALDEETR 1188
Score = 35.8 bits (81), Expect = 0.066
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Frame = +1
Query: 10 KKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQME----QENNSA---LT 168
++LE ++ ++ + +EQ + +++ KAT + ++ L E Q+N SA L
Sbjct: 1732 RRLEARIAQLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLE 1791
Query: 169 TQNRRLQRDLEEV-NETKEARDQEIKVLKTKVERLERRVRTGGR 297
QN+ L+ L E+ K I L+ K+ +LE +V R
Sbjct: 1792 RQNKELRSKLHEMEGAVKSKFKSTIAALEAKIAQLEEQVEQEAR 1835
>sp|Q61879|MYH10_MOUSE Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy
chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin
heavy chain, type B) (Nonmuscle myosin heavy chain-B)
(NMMHC-B)
Length = 1976
Score = 67.4 bits (163), Expect = 2e-11
Identities = 32/86 (37%), Positives = 51/86 (59%)
Frame = +1
Query: 10 KKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQ 189
++ E+KLKEI + DE+R AD EQ+EKA R K+ +R L+ +E + R+LQ
Sbjct: 1845 RRTEKKLKEIFMQVEDERRHADQYKEQMEKANARMKQLKRQLEEAEEEATRANASRRKLQ 1904
Query: 190 RDLEEVNETKEARDQEIKVLKTKVER 267
R+L++ E E +E+ LK ++ R
Sbjct: 1905 RELDDATEANEGLSREVSTLKNRLRR 1930
Score = 36.6 bits (83), Expect = 0.039
Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Frame = +1
Query: 16 LERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAE-------RSLQMEQENNSALTTQ 174
LE+K K+ L+ +E+ + E+ ++A ++ E R+L+ E Q
Sbjct: 1446 LEKKQKKFDQLLAEEKGISARYAEERDRAEAEAREKETKALSLARALEEALEAKEEFERQ 1505
Query: 175 NRRLQRDLE--------------EVNETKEARDQEIKVLKTKVERLE 273
N++L+ D+E E+ ++K A +Q+++ ++T++E LE
Sbjct: 1506 NKQLRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELE 1552
Score = 30.8 bits (68), Expect = 2.1
Identities = 23/111 (20%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Frame = +1
Query: 16 LERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQ-- 189
L ++++E+ A + DE+++ A+ +K K E ++ + + Q R+LQ
Sbjct: 1594 LLKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQLRKLQAQ 1653
Query: 190 -----RDLEEVNETKE-------ARDQEIKVLKTKVERLERRVRTGGRANR 306
R+LEE +++ ++++K L+ ++ +L+ + + RA R
Sbjct: 1654 MKDYQRELEEARASRDEIFAQSKESEKKLKSLEAEILQLQEELASSERARR 1704
Score = 28.9 bits (63), Expect = 8.1
Identities = 19/94 (20%), Positives = 40/94 (42%)
Frame = +1
Query: 7 NKKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRL 186
+K+ E+KLK + A ++ Q ++ A + + SAL + RRL
Sbjct: 1675 SKESEKKLKSLEAEILQLQEELASSERARRHAEQERDELADEIANSASGKSALLDEKRRL 1734
Query: 187 QRDLEEVNETKEARDQEIKVLKTKVERLERRVRT 288
+ + ++ E E +++L + + +V T
Sbjct: 1735 EARIAQLEEELEEEQSNMELLNDRFRKTTLQVDT 1768
>sp|P35580|MYH10_HUMAN Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy
chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin
heavy chain, type B) (Nonmuscle myosin heavy chain-B)
(NMMHC-B)
Length = 1976
Score = 67.4 bits (163), Expect = 2e-11
Identities = 32/86 (37%), Positives = 51/86 (59%)
Frame = +1
Query: 10 KKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQ 189
++ E+KLKEI + DE+R AD EQ+EKA R K+ +R L+ +E + R+LQ
Sbjct: 1845 RRTEKKLKEIFMQVEDERRHADQYKEQMEKANARMKQLKRQLEEAEEEATRANASRRKLQ 1904
Query: 190 RDLEEVNETKEARDQEIKVLKTKVER 267
R+L++ E E +E+ LK ++ R
Sbjct: 1905 RELDDATEANEGLSREVSTLKNRLRR 1930
Score = 37.0 bits (84), Expect = 0.030
Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Frame = +1
Query: 16 LERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAE-------RSLQMEQENNSALTTQ 174
LE+K K+ L+ +E+ + E+ ++A ++ E R+L+ E Q
Sbjct: 1446 LEKKQKKFDQLLAEEKSISARYAEERDRAEAEAREKETKALSLARALEEALEAKEEFERQ 1505
Query: 175 NRRLQRDLE--------------EVNETKEARDQEIKVLKTKVERLE 273
N++L+ D+E E+ ++K A +Q+++ ++T++E LE
Sbjct: 1506 NKQLRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELE 1552
Score = 30.8 bits (68), Expect = 2.1
Identities = 23/111 (20%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Frame = +1
Query: 16 LERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQ-- 189
L ++++E+ A + DE+++ A+ +K K E ++ + + Q R+LQ
Sbjct: 1594 LIKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQLRKLQAQ 1653
Query: 190 -----RDLEEVNETKE-------ARDQEIKVLKTKVERLERRVRTGGRANR 306
R+LEE +++ ++++K L+ ++ +L+ + + RA R
Sbjct: 1654 MKDYQRELEEARASRDEIFAQSKESEKKLKSLEAEILQLQEELASSERARR 1704
Score = 28.9 bits (63), Expect = 8.1
Identities = 19/94 (20%), Positives = 40/94 (42%)
Frame = +1
Query: 7 NKKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRL 186
+K+ E+KLK + A ++ Q ++ A + + SAL + RRL
Sbjct: 1675 SKESEKKLKSLEAEILQLQEELASSERARRHAEQERDELADEITNSASGKSALLDEKRRL 1734
Query: 187 QRDLEEVNETKEARDQEIKVLKTKVERLERRVRT 288
+ + ++ E E +++L + + +V T
Sbjct: 1735 EARIAQLEEELEEEQSNMELLNDRFRKTTLQVDT 1768
>sp|Q9JLT0|MYH10_RAT Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy
chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin
heavy chain, type B) (Nonmuscle myosin heavy chain-B)
(NMMHC-B)
Length = 1976
Score = 67.4 bits (163), Expect = 2e-11
Identities = 32/86 (37%), Positives = 51/86 (59%)
Frame = +1
Query: 10 KKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQ 189
++ E+KLKEI + DE+R AD EQ+EKA R K+ +R L+ +E + R+LQ
Sbjct: 1845 RRTEKKLKEIFMQVEDERRHADQYKEQMEKANARMKQLKRQLEEAEEEATRANASRRKLQ 1904
Query: 190 RDLEEVNETKEARDQEIKVLKTKVER 267
R+L++ E E +E+ LK ++ R
Sbjct: 1905 RELDDATEANEGLSREVSTLKNRLRR 1930
Score = 36.6 bits (83), Expect = 0.039
Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Frame = +1
Query: 16 LERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAE-------RSLQMEQENNSALTTQ 174
LE+K K+ L+ +E+ + E+ ++A ++ E R+L+ E Q
Sbjct: 1446 LEKKQKKFDQLLAEEKGISARYAEERDRAEAEAREKETKALSLARALEEALEAKEEFERQ 1505
Query: 175 NRRLQRDLE--------------EVNETKEARDQEIKVLKTKVERLE 273
N++L+ D+E E+ ++K A +Q+++ ++T++E LE
Sbjct: 1506 NKQLRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELE 1552
Score = 30.8 bits (68), Expect = 2.1
Identities = 23/111 (20%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Frame = +1
Query: 16 LERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQ-- 189
L ++++E+ A + DE+++ A+ +K K E ++ + + Q R+LQ
Sbjct: 1594 LLKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQLRKLQAQ 1653
Query: 190 -----RDLEEVNETKE-------ARDQEIKVLKTKVERLERRVRTGGRANR 306
R+LEE +++ ++++K L+ ++ +L+ + + RA R
Sbjct: 1654 MKDYQRELEEARASRDEIFAQSKESEKKLKSLEAEILQLQEELASSERARR 1704
Score = 28.9 bits (63), Expect = 8.1
Identities = 19/94 (20%), Positives = 40/94 (42%)
Frame = +1
Query: 7 NKKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRL 186
+K+ E+KLK + A ++ Q ++ A + + SAL + RRL
Sbjct: 1675 SKESEKKLKSLEAEILQLQEELASSERARRHAEQERDELADEIANSASGKSALLDEKRRL 1734
Query: 187 QRDLEEVNETKEARDQEIKVLKTKVERLERRVRT 288
+ + ++ E E +++L + + +V T
Sbjct: 1735 EARIAQLEEELEEEQSNMELLNDRFRKTTLQVDT 1768
>sp|Q27991|MYH10_BOVIN Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy
chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin
heavy chain, type B) (Nonmuscle myosin heavy chain-B)
(NMMHC-B)
Length = 1976
Score = 67.4 bits (163), Expect = 2e-11
Identities = 32/86 (37%), Positives = 51/86 (59%)
Frame = +1
Query: 10 KKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQ 189
++ E+KLKEI + DE+R AD EQ+EKA R K+ +R L+ +E + R+LQ
Sbjct: 1845 RRTEKKLKEIFMQVEDERRHADQYKEQMEKANARMKQLKRQLEEAEEEATRANASRRKLQ 1904
Query: 190 RDLEEVNETKEARDQEIKVLKTKVER 267
R+L++ E E +E+ LK ++ R
Sbjct: 1905 RELDDATEANEGLSREVSTLKNRLRR 1930
Score = 37.0 bits (84), Expect = 0.030
Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Frame = +1
Query: 16 LERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAE-------RSLQMEQENNSALTTQ 174
LE+K K+ L+ +E+ + E+ ++A ++ E R+L+ E Q
Sbjct: 1446 LEKKQKKFDQLLAEEKNISARYAEERDRAEAEAREKETKALSLARALEEALEAREEAERQ 1505
Query: 175 NRRLQRDLE--------------EVNETKEARDQEIKVLKTKVERLE 273
N++L+ D+E E+ ++K A +Q+++ ++T++E LE
Sbjct: 1506 NKQLRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELE 1552
Score = 30.8 bits (68), Expect = 2.1
Identities = 23/111 (20%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Frame = +1
Query: 16 LERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQ-- 189
L ++++E+ A + DE+++ A+ +K K E ++ + + Q R+LQ
Sbjct: 1594 LIKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQLRKLQAQ 1653
Query: 190 -----RDLEEVNETKE-------ARDQEIKVLKTKVERLERRVRTGGRANR 306
R+LEE +++ ++++K L+ ++ +L+ + + RA R
Sbjct: 1654 MKDYQRELEEARASRDEIFAQSKESEKKLKSLEAEILQLQEELASSERARR 1704
Score = 28.9 bits (63), Expect = 8.1
Identities = 19/94 (20%), Positives = 40/94 (42%)
Frame = +1
Query: 7 NKKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRL 186
+K+ E+KLK + A ++ Q ++ A + + SAL + RRL
Sbjct: 1675 SKESEKKLKSLEAEILQLQEELASSERARRHAEQERDELADEIANSASGKSALLDEKRRL 1734
Query: 187 QRDLEEVNETKEARDQEIKVLKTKVERLERRVRT 288
+ + ++ E E +++L + + +V T
Sbjct: 1735 EARIAQLEEELEEEQSNMELLNDRFRKTTLQVDT 1768
>sp|Q99105|MYSU_RABIT Myosin heavy chain, embryonic smooth muscle isoform
Length = 501
Score = 67.4 bits (163), Expect = 2e-11
Identities = 32/86 (37%), Positives = 51/86 (59%)
Frame = +1
Query: 10 KKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQ 189
++ E+KLKEI + DE+R AD EQ+EKA R K+ +R L+ +E + R+LQ
Sbjct: 370 RRTEKKLKEIFMQVEDERRHADQYKEQMEKANARMKQLKRQLEEAEEEATRANASRRKLQ 429
Query: 190 RDLEEVNETKEARDQEIKVLKTKVER 267
R+L++ E E +E+ LK ++ R
Sbjct: 430 RELDDATEANEGLSREVSTLKNRLRR 455
Score = 31.6 bits (70), Expect = 1.3
Identities = 24/111 (21%), Positives = 53/111 (47%), Gaps = 14/111 (12%)
Frame = +1
Query: 16 LERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQ-- 189
L ++++E+ A + DE+++ A+ +K K E ++ + Q RRLQ
Sbjct: 119 LTKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARERRVKQLRRLQAQ 178
Query: 190 -----RDLEEVNETKE-------ARDQEIKVLKTKVERLERRVRTGGRANR 306
R+LEE +++ ++++K L+ ++ +L+ + + RA R
Sbjct: 179 MKDYQRELEEARGSRDEIFAQSKESEKKLKSLEAEILQLQEELASSERARR 229
Score = 30.0 bits (66), Expect = 3.6
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 14/79 (17%)
Frame = +1
Query: 79 AIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQRDLE--------------EVNET 216
A E+ KA + E +L+ ++E QN++L+ D+E E+ ++
Sbjct: 3 AREKETKALSLSRALEEALEAKEE----FERQNKQLRADMEDLMSSKDDVGKNVHELEKS 58
Query: 217 KEARDQEIKVLKTKVERLE 273
K A +Q+++ ++T++E LE
Sbjct: 59 KRALEQQVEEMRTQLEELE 77
Score = 29.3 bits (64), Expect = 6.2
Identities = 19/94 (20%), Positives = 40/94 (42%)
Frame = +1
Query: 7 NKKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRL 186
+K+ E+KLK + A ++ Q ++ A + + SAL + RRL
Sbjct: 200 SKESEKKLKSLEAEILQLQEELASSERARRHAEQERDELADEIANSASGKSALLDEKRRL 259
Query: 187 QRDLEEVNETKEARDQEIKVLKTKVERLERRVRT 288
+ + ++ E E +++L + + +V T
Sbjct: 260 EARMRQLEEELEEEQSNMELLNDRFRKTTLQVDT 293
>sp|O08638|MYH11_MOUSE Myosin-11 (Myosin heavy chain, smooth muscle isoform) (SMMHC)
Length = 1972
Score = 66.6 bits (161), Expect = 4e-11
Identities = 30/86 (34%), Positives = 54/86 (62%)
Frame = +1
Query: 10 KKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQ 189
K+ ++KLKE++ + DE++ A+ EQ EK + K+ +R L+ +E + + R+LQ
Sbjct: 1845 KQKDKKLKEVLLQVEDERKMAEQYKEQAEKGNTKVKQLKRQLEEAEEESQCINANRRKLQ 1904
Query: 190 RDLEEVNETKEARDQEIKVLKTKVER 267
R+L+E E+ EA +E+ LK+K+ R
Sbjct: 1905 RELDEATESNEAMGREVNALKSKLRR 1930
Score = 37.7 bits (86), Expect = 0.017
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Frame = +1
Query: 10 KKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQME----QENNSA---LT 168
++LE ++ ++ + +EQ + +++ KAT + ++ L E Q+N SA L
Sbjct: 1732 RRLEARIAQLEEELEEEQGNMEAMSDRVRKATLQAEQLSNELATERSTAQKNESARQQLE 1791
Query: 169 TQNRRLQRDLEEVNETKEAR-DQEIKVLKTKVERLERRVRTGGR 297
QN+ L+ L+EV +A+ + L+ K+ +LE +V R
Sbjct: 1792 RQNKELRSKLQEVEGAVKAKLKSTVAALEAKIAQLEEQVEQEAR 1835
Score = 34.7 bits (78), Expect = 0.15
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 14/102 (13%)
Frame = +1
Query: 13 KLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQR 192
K E +L+ +A + +E + +NA+++I + G + L E+ + Q R L
Sbjct: 1087 KKEEELQAALARLDEEIAQKNNALKKIRELEGHISDLQEDLDSERAARNKAEKQKRDLGE 1146
Query: 193 DLEEVN--------------ETKEARDQEIKVLKTKVERLER 276
+LE + E + R+QE+ VLK ++ R
Sbjct: 1147 ELEALKTELEDTLDSTATQQELRAKREQEVTVLKKALDEETR 1188
>sp|Q99323|MYSN_DROME Myosin heavy chain, non-muscle (Zipper protein) (Myosin II)
(Non-muscle MHC)
Length = 2057
Score = 66.6 bits (161), Expect = 4e-11
Identities = 33/87 (37%), Positives = 55/87 (63%)
Frame = +1
Query: 7 NKKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRL 186
N+K+++K+KE+ + DE+R D EQ++K R K +R+L +E TQ R+
Sbjct: 1928 NRKMDKKIKELTMNIEDERRHVDQHKEQMDKLNSRIKLLKRNLDETEEELQKEKTQKRKY 1987
Query: 187 QRDLEEVNETKEARDQEIKVLKTKVER 267
QR+ E++ E++EA ++EI LKTK+ R
Sbjct: 1988 QRECEDMIESQEAMNREINSLKTKLRR 2014
Score = 34.3 bits (77), Expect = 0.19
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Frame = +1
Query: 16 LERKLKEIMA---LMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTT-QNRR 183
LE +L+E + +++D R+A IEQ+ E+S + EN AL QN+
Sbjct: 1825 LEEELEEEQSNSEVLLDRSRKAQLQIEQLTTELAN----EKSNSQKNENGRALLERQNKE 1880
Query: 184 LQRDLEEVNETKEAR-DQEIKVLKTKVERLERRVRTGGR 297
L+ L E+ + + I L+ K+ LE ++ G+
Sbjct: 1881 LKAKLAEIETAQRTKVKATIATLEAKIANLEEQLENEGK 1919
Score = 33.5 bits (75), Expect = 0.33
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Frame = +1
Query: 43 ALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQRDLEEV----- 207
+LM+DE+RR + I +E+ L+ EQ N+ L ++R+ Q +E++
Sbjct: 1809 SLMIDEKRRLEARIATLEE----------ELEEEQSNSEVLLDRSRKAQLQIEQLTTELA 1858
Query: 208 NETKEAR---------DQEIKVLKTKVERLERRVRTGGRA 300
NE ++ +++ K LK K+ +E RT +A
Sbjct: 1859 NEKSNSQKNENGRALLERQNKELKAKLAEIETAQRTKVKA 1898
Score = 30.4 bits (67), Expect = 2.8
Identities = 24/101 (23%), Positives = 43/101 (42%)
Frame = +1
Query: 4 NNKKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRR 183
+ KKLE LKEI M + ++A++ +K + K A R +
Sbjct: 1702 SKKKLEGDLKEIETTMEMHNKVKEDALKHAKKLQAQVKDALRDAE--------------E 1747
Query: 184 LQRDLEEVNETKEARDQEIKVLKTKVERLERRVRTGGRANR 306
+ EE+ + D ++K L+ +V +L + + RA R
Sbjct: 1748 AKAAKEELQALSKEADGKVKALEAEVLQLTEDLASSERARR 1788
Score = 30.0 bits (66), Expect = 3.6
Identities = 22/98 (22%), Positives = 44/98 (44%)
Frame = +1
Query: 13 KLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQR 192
++ER E+ Q+ A+N Q+E+A + A +S S + +Q Q+
Sbjct: 1354 EIERARSELQEKCTKLQQEAENITNQLEEAELKASAAVKSA-------SNMESQLTEAQQ 1406
Query: 193 DLEEVNETKEARDQEIKVLKTKVERLERRVRTGGRANR 306
LEE K +++ ++++ E L+ ++ A R
Sbjct: 1407 LLEEETRQKLGLSSKLRQIESEKEALQEQLEEDDEAKR 1444
Score = 30.0 bits (66), Expect = 3.6
Identities = 20/102 (19%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Frame = +1
Query: 1 RNNKKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENN-------S 159
++ +E +L E L+ +E R+ ++ + + + L+ + E +
Sbjct: 1392 KSASNMESQLTEAQQLLEEETRQKLGLSSKLRQIESEKEALQEQLEEDDEAKRNYERKLA 1451
Query: 160 ALTTQNRRLQRDLEEVNETKEARDQEIKVLKTKVERLERRVR 285
+TTQ + +++ EE + + ++ K L +E LER+V+
Sbjct: 1452 EVTTQMQEIKKKAEEDADLAKELEEGKKRLNKDIEALERQVK 1493
>sp|P35748|MYH11_RABIT Myosin-11 (Myosin heavy chain, smooth muscle isoform) (SMMHC)
Length = 1972
Score = 66.2 bits (160), Expect = 5e-11
Identities = 30/86 (34%), Positives = 54/86 (62%)
Frame = +1
Query: 10 KKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQ 189
K+ ++KLKE++ + DE++ A+ EQ EK + K+ +R L+ +E + + R+LQ
Sbjct: 1845 KQRDKKLKEMLLQVEDERKMAEQYKEQAEKGNAKVKQLKRQLEEAEEESQRINANRRKLQ 1904
Query: 190 RDLEEVNETKEARDQEIKVLKTKVER 267
R+L+E E+ EA +E+ LK+K+ R
Sbjct: 1905 RELDEATESNEAMGREVNALKSKLRR 1930
Score = 36.6 bits (83), Expect = 0.039
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Frame = +1
Query: 10 KKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQME----QENNSA---LT 168
++LE ++ ++ + +EQ + +++ KAT + ++ L E Q+N SA L
Sbjct: 1732 RRLEARIAQLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLE 1791
Query: 169 TQNRRLQRDLEEV-NETKEARDQEIKVLKTKVERLERRVRTGGR 297
QN+ L+ L+E+ K I L+ K+ +LE +V R
Sbjct: 1792 RQNKELKSKLQEMEGAVKSKFKSTIAALEAKIAQLEEQVEQEAR 1835
>sp|Q8VDD5|MYH9_MOUSE Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle myosin heavy
chain IIa) (NMMHC II-a) (NMMHC-IIA) (Cellular myosin
heavy chain, type A) (Nonmuscle myosin heavy chain-A)
(NMMHC-A)
Length = 1960
Score = 65.5 bits (158), Expect = 8e-11
Identities = 30/86 (34%), Positives = 54/86 (62%)
Frame = +1
Query: 10 KKLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQ 189
++ E+KLK+++ + DE+R A+ +Q +KA+ R K+ +R L+ +E R+LQ
Sbjct: 1838 RRTEKKLKDVLLQVEDERRNAEQFKDQADKASTRLKQLKRQLEEAEEEAQRANASRRKLQ 1897
Query: 190 RDLEEVNETKEARDQEIKVLKTKVER 267
R+LE+ ET +A ++E+ LK K+ R
Sbjct: 1898 RELEDATETADAMNREVSSLKNKLRR 1923
Score = 33.5 bits (75), Expect = 0.33
Identities = 21/98 (21%), Positives = 46/98 (46%), Gaps = 14/98 (14%)
Frame = +1
Query: 13 KLERKLKEIMALMVDEQRRADNAIEQIEKATGRYKKAERSLQMEQENNSALTTQNRRLQR 192
K E +L+ +A + +E + + A+++I + + + + L+ E+ + + Q R L
Sbjct: 1080 KKEEELQAALARVEEEAAQKNMALKKIRELETQISELQEDLESERASRNKAEKQKRDLGE 1139
Query: 193 DLEEVN--------------ETKEARDQEIKVLKTKVE 264
+LE + E + R+QE+ +LK +E
Sbjct: 1140 ELEALKTELEDTLDSTAAQQELRSKREQEVSILKKTLE 1177
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,609,255
Number of Sequences: 369166
Number of extensions: 929048
Number of successful extensions: 4372
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4334
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3600891075
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)