Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_001_M19
(498 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P34058|HS90B_RAT Heat shock protein HSP 90-beta (HSP 84) 128 7e-30
sp|Q04619|HS90B_CHICK Heat shock cognate protein HSP 90-beta 128 7e-30
sp|Q9GKX8|HS90B_HORSE Heat shock protein HSP 90-beta (HSP 84) 128 7e-30
sp|P08238|HS90B_HUMAN Heat shock protein HSP 90-beta (HSP 8... 128 7e-30
sp|P04811|HSP83_DROVI Heat shock protein 83 (HSP 82) 128 9e-30
sp|P04810|HSP83_DROSI Heat shock protein 83 (HSP 82) 128 9e-30
sp|P02828|HSP83_DROME Heat shock protein 83 (HSP 82) 128 9e-30
sp|O02192|HSP83_DROAV Heat shock protein 83 (HSP 82) 128 9e-30
sp|O57521|HS90B_BRARE Heat shock protein HSP 90-beta 127 1e-29
sp|O61998|HSP90_BRUPA Heat shock protein 90 127 1e-29
>sp|P34058|HS90B_RAT Heat shock protein HSP 90-beta (HSP 84)
Length = 724
Score = 128 bits (322), Expect = 7e-30
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3
Query: 309 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 488
LNKTKPIWTRNPDD++QE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+RAPF
Sbjct: 282 LNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPF 341
Query: 489 DLF 497
DLF
Sbjct: 342 DLF 344
>sp|Q04619|HS90B_CHICK Heat shock cognate protein HSP 90-beta
Length = 725
Score = 128 bits (322), Expect = 7e-30
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3
Query: 309 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 488
LNKTKPIWTRNPDD++QE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+RAPF
Sbjct: 283 LNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPF 342
Query: 489 DLF 497
DLF
Sbjct: 343 DLF 345
>sp|Q9GKX8|HS90B_HORSE Heat shock protein HSP 90-beta (HSP 84)
Length = 724
Score = 128 bits (322), Expect = 7e-30
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3
Query: 309 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 488
LNKTKPIWTRNPDD++QE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+RAPF
Sbjct: 282 LNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPF 341
Query: 489 DLF 497
DLF
Sbjct: 342 DLF 344
>sp|P08238|HS90B_HUMAN Heat shock protein HSP 90-beta (HSP 84) (HSP 90)
Length = 724
Score = 128 bits (322), Expect = 7e-30
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3
Query: 309 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 488
LNKTKPIWTRNPDD++QE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+RAPF
Sbjct: 282 LNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPF 341
Query: 489 DLF 497
DLF
Sbjct: 342 DLF 344
>sp|P04811|HSP83_DROVI Heat shock protein 83 (HSP 82)
Length = 374
Score = 128 bits (321), Expect = 9e-30
Identities = 57/63 (90%), Positives = 60/63 (95%)
Frame = +3
Query: 309 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 488
LNKTKPIWTRNPDD+SQE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+R PF
Sbjct: 274 LNKTKPIWTRNPDDISQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRTPF 333
Query: 489 DLF 497
DLF
Sbjct: 334 DLF 336
>sp|P04810|HSP83_DROSI Heat shock protein 83 (HSP 82)
Length = 375
Score = 128 bits (321), Expect = 9e-30
Identities = 57/63 (90%), Positives = 60/63 (95%)
Frame = +3
Query: 309 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 488
LNKTKPIWTRNPDD+SQE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+R PF
Sbjct: 275 LNKTKPIWTRNPDDISQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRTPF 334
Query: 489 DLF 497
DLF
Sbjct: 335 DLF 337
>sp|P02828|HSP83_DROME Heat shock protein 83 (HSP 82)
Length = 717
Score = 128 bits (321), Expect = 9e-30
Identities = 57/63 (90%), Positives = 60/63 (95%)
Frame = +3
Query: 309 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 488
LNKTKPIWTRNPDD+SQE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+R PF
Sbjct: 275 LNKTKPIWTRNPDDISQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRTPF 334
Query: 489 DLF 497
DLF
Sbjct: 335 DLF 337
>sp|O02192|HSP83_DROAV Heat shock protein 83 (HSP 82)
Length = 716
Score = 128 bits (321), Expect = 9e-30
Identities = 57/63 (90%), Positives = 60/63 (95%)
Frame = +3
Query: 309 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 488
LNKTKPIWTRNPDD+SQE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+R PF
Sbjct: 274 LNKTKPIWTRNPDDISQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRTPF 333
Query: 489 DLF 497
DLF
Sbjct: 334 DLF 336
>sp|O57521|HS90B_BRARE Heat shock protein HSP 90-beta
Length = 725
Score = 127 bits (320), Expect = 1e-29
Identities = 57/63 (90%), Positives = 60/63 (95%)
Frame = +3
Query: 309 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 488
LNKTKPIWTRNPDD+S E+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF P+RAPF
Sbjct: 281 LNKTKPIWTRNPDDISNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPF 340
Query: 489 DLF 497
DLF
Sbjct: 341 DLF 343
>sp|O61998|HSP90_BRUPA Heat shock protein 90
Length = 717
Score = 127 bits (319), Expect = 1e-29
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3
Query: 309 LNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFCPKRAPF 488
LNKTKPIWTRNPDD+S E+YAEFYKSL+NDWEDHLAVKHFSVEGQLEFRALLF P+RAPF
Sbjct: 272 LNKTKPIWTRNPDDISNEEYAEFYKSLSNDWEDHLAVKHFSVEGQLEFRALLFVPQRAPF 331
Query: 489 DLF 497
DLF
Sbjct: 332 DLF 334
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,685,789
Number of Sequences: 369166
Number of extensions: 441378
Number of successful extensions: 2015
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2012
length of database: 68,354,980
effective HSP length: 102
effective length of database: 49,512,010
effective search space used: 3119256630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)