Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_001_M18
(841 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P53471|ACT2_SCHMA Actin-2 565 e-161
sp|P30163|ACT2_ONCVO Actin-2 565 e-161
sp|P60712|ACTB_BOVIN Actin, cytoplasmic 1 (Beta-actin) >gi|... 565 e-161
sp|Q91ZK5|ACTB_SIGHI Actin, cytoplasmic 1 (Beta-actin) 565 e-161
sp|P48975|ACTB_CRIGR Actin, cytoplasmic 1 (Beta-actin) 565 e-161
sp|P63260|ACTG_MOUSE Actin, cytoplasmic 2 (Gamma-actin) >gi... 564 e-161
sp|P15475|ACTB_XENBO Actin, cytoplasmic 1 (Beta actin) 564 e-161
sp|P53505|ACT5_XENLA Actin, cytoplasmic type 5 564 e-161
sp|P53478|ACT5_CHICK Actin, cytoplasmic type 5 564 e-160
sp|P10984|ACT2_CAEEL Actin-2 563 e-160
>sp|P53471|ACT2_SCHMA Actin-2
Length = 376
Score = 565 bits (1456), Expect = e-161
Identities = 277/280 (98%), Positives = 279/280 (99%)
Frame = +1
Query: 1 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 180
VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK
Sbjct: 10 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 69
Query: 181 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 360
YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN
Sbjct: 70 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 129
Query: 361 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 540
TPAMYV IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 130 TPAMYVGIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Query: 541 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 720
LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI
Sbjct: 190 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
Query: 721 TIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVD 840
TIGNERFRCPE+LFQPSFLGMESAG+HETTFNSIMKCDVD
Sbjct: 250 TIGNERFRCPEALFQPSFLGMESAGVHETTFNSIMKCDVD 289
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 565 bits (1456), Expect = e-161
Identities = 276/280 (98%), Positives = 280/280 (100%)
Frame = +1
Query: 1 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 180
VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK
Sbjct: 10 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 69
Query: 181 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 360
YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN
Sbjct: 70 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 129
Query: 361 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 540
TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 130 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Query: 541 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 720
LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI
Sbjct: 190 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
Query: 721 TIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVD 840
T+GNERFRCPE+LFQPSFLGMESAGIHETT+NSIMKCD+D
Sbjct: 250 TVGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDID 289
>sp|P60712|ACTB_BOVIN Actin, cytoplasmic 1 (Beta-actin)
sp|P60713|ACTB_SHEEP Actin, cytoplasmic 1 (Beta-actin)
sp|Q5R1X3|ACTB_PANTR Actin, cytoplasmic 1 (Beta-actin)
sp|P60710|ACTB_MOUSE Actin, cytoplasmic 1 (Beta-actin)
sp|Q711N9|ACTB_MESAU Actin, cytoplasmic 1 (Beta-actin)
sp|P60708|ACTB_HORSE Actin, cytoplasmic 1 (Beta-actin)
sp|Q76N69|ACTB_CERAE Actin, cytoplasmic 1 (Beta-actin)
sp|Q71FK5|ACTB_CAVPO Actin, cytoplasmic 1 (Beta-actin)
sp|P60707|ACTB_TRIVU Actin, cytoplasmic 1 (Beta-actin)
sp|P60711|ACTB_RAT Actin, cytoplasmic 1 (Beta-actin)
sp|P60709|ACTB_HUMAN Actin, cytoplasmic 1 (Beta-actin)
sp|P60706|ACTB_CHICK Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 565 bits (1455), Expect = e-161
Identities = 277/280 (98%), Positives = 279/280 (99%)
Frame = +1
Query: 1 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 180
VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK
Sbjct: 9 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 68
Query: 181 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 360
YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN
Sbjct: 69 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 128
Query: 361 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 540
TPAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 129 TPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 188
Query: 541 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 720
LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI
Sbjct: 189 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 248
Query: 721 TIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVD 840
TIGNERFRCPE+LFQPSFLGMES GIHETTFNSIMKCDVD
Sbjct: 249 TIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVD 288
>sp|Q91ZK5|ACTB_SIGHI Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 565 bits (1455), Expect = e-161
Identities = 277/280 (98%), Positives = 279/280 (99%)
Frame = +1
Query: 1 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 180
VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK
Sbjct: 9 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 68
Query: 181 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 360
YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN
Sbjct: 69 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 128
Query: 361 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 540
TPAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 129 TPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 188
Query: 541 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 720
LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI
Sbjct: 189 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 248
Query: 721 TIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVD 840
TIGNERFRCPE+LFQPSFLGMES GIHETTFNSIMKCDVD
Sbjct: 249 TIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVD 288
>sp|P48975|ACTB_CRIGR Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 565 bits (1455), Expect = e-161
Identities = 277/280 (98%), Positives = 279/280 (99%)
Frame = +1
Query: 1 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 180
VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK
Sbjct: 9 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 68
Query: 181 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 360
YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN
Sbjct: 69 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 128
Query: 361 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 540
TPAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 129 TPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 188
Query: 541 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 720
LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI
Sbjct: 189 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 248
Query: 721 TIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVD 840
TIGNERFRCPE+LFQPSFLGMES GIHETTFNSIMKCDVD
Sbjct: 249 TIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVD 288
>sp|P63260|ACTG_MOUSE Actin, cytoplasmic 2 (Gamma-actin)
sp|P63259|ACTG_RAT Actin, cytoplasmic 2 (Gamma-actin)
sp|P63257|ACTG_TRIVU Actin, cytoplasmic 2 (Gamma-actin)
sp|P63261|ACTG_HUMAN Actin, cytoplasmic 2 (Gamma-actin)
sp|P63258|ACTG_BOVIN Actin, cytoplasmic 2 (Gamma-actin)
Length = 375
Score = 564 bits (1454), Expect = e-161
Identities = 276/280 (98%), Positives = 279/280 (99%)
Frame = +1
Query: 1 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 180
V+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK
Sbjct: 9 VIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 68
Query: 181 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 360
YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN
Sbjct: 69 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 128
Query: 361 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 540
TPAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 129 TPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 188
Query: 541 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 720
LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI
Sbjct: 189 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 248
Query: 721 TIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVD 840
TIGNERFRCPE+LFQPSFLGMES GIHETTFNSIMKCDVD
Sbjct: 249 TIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVD 288
>sp|P15475|ACTB_XENBO Actin, cytoplasmic 1 (Beta actin)
Length = 376
Score = 564 bits (1454), Expect = e-161
Identities = 276/280 (98%), Positives = 279/280 (99%)
Frame = +1
Query: 1 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 180
V+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK
Sbjct: 10 VIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 69
Query: 181 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 360
YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN
Sbjct: 70 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 129
Query: 361 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 540
TPAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 130 TPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Query: 541 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 720
LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI
Sbjct: 190 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
Query: 721 TIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVD 840
TIGNERFRCPE+LFQPSFLGMES GIHETTFNSIMKCDVD
Sbjct: 250 TIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVD 289
>sp|P53505|ACT5_XENLA Actin, cytoplasmic type 5
Length = 376
Score = 564 bits (1454), Expect = e-161
Identities = 276/280 (98%), Positives = 279/280 (99%)
Frame = +1
Query: 1 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 180
V+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK
Sbjct: 10 VIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 69
Query: 181 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 360
YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN
Sbjct: 70 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 129
Query: 361 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 540
TPAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 130 TPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Query: 541 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 720
LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI
Sbjct: 190 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
Query: 721 TIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVD 840
TIGNERFRCPE+LFQPSFLGMES GIHETTFNSIMKCDVD
Sbjct: 250 TIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVD 289
>sp|P53478|ACT5_CHICK Actin, cytoplasmic type 5
Length = 376
Score = 564 bits (1453), Expect = e-160
Identities = 276/280 (98%), Positives = 279/280 (99%)
Frame = +1
Query: 1 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 180
VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK
Sbjct: 10 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 69
Query: 181 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 360
YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN
Sbjct: 70 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 129
Query: 361 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 540
TPAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 130 TPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Query: 541 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 720
LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI
Sbjct: 190 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
Query: 721 TIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVD 840
TIGNERFRCPE++FQPSFLGMES GIHETTFNSIMKCDVD
Sbjct: 250 TIGNERFRCPEAIFQPSFLGMESCGIHETTFNSIMKCDVD 289
>sp|P10984|ACT2_CAEEL Actin-2
Length = 376
Score = 563 bits (1452), Expect = e-160
Identities = 275/280 (98%), Positives = 280/280 (100%)
Frame = +1
Query: 1 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 180
VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK
Sbjct: 10 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 69
Query: 181 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 360
YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN
Sbjct: 70 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 129
Query: 361 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 540
TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 130 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Query: 541 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 720
LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI
Sbjct: 190 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
Query: 721 TIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVD 840
T+GNERFRCPE+LFQPSFLGMESAGIHET++NSIMKCD+D
Sbjct: 250 TVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDID 289
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,359,309
Number of Sequences: 369166
Number of extensions: 2170958
Number of successful extensions: 6658
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6490
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8197207050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)